Streptomyces noursei NK660: DC74_3685
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Entry
DC74_3685 CDS
T03082
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
salu
Streptomyces noursei NK660
Pathway
salu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DC74_3685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salu03019
]
DC74_3685
03400 DNA repair and recombination proteins [BR:
salu03400
]
DC74_3685
Enzymes [BR:
salu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DC74_3685
Messenger RNA biogenesis [BR:
salu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DC74_3685
DNA repair and recombination proteins [BR:
salu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DC74_3685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Smoothelin
Motif
Other DBs
NCBI-ProteinID:
AIA04176
LinkDB
All DBs
Position
4198833..4200884
Genome browser
AA seq
683 aa
AA seq
DB search
MGVEGDVDVDVASGPEAGEAVQTLRRVFGYDAFRGDQEEIIEQVIGGGDAVVLMPTGGGK
SLCYQIPSLVRPGVGVVISPLIALMQDQVDALRALGVRAGFLNSTQDFEERRLIEAEFLA
GELDLLYLAPERLRVEQTVQLLDRGKISLFAIDEAHCVAQWGHDFRPDYLMLSMLHDRWP
DVPRIALTATATKATHEEITSRLRMDGARHFVASFDRPNIQYRIAAKSEPKRQLLELLRG
EHAGDAGIVYCLSRASVEKTAQFLVDNGIDAVPYHAGLDARVRAANQARFLREDGLVVVA
TIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGQPSTAWLAYGLQDVVQQRKMI
DGSEGDDAHRRRLSAHLDAMLAMCETVECRRVRLLAYFDQESGPCGNCDTCLTPPQTWDG
TVSAQKLLSTVVRLKRERGQKFGAGQIIDILLGRKTAKVIQFDHDGLSVFGIGEDLREAE
WRGVVRQLLAQGLLAVEGDYGTLVLTESSGEVLRGQRQVPMRREPEKAARAAKAKSKGKR
APVDLPEEALPVFEVLRGWRGATAKEQGVPAYVIFHDATLREIATARPTSLAELGTLTGV
GENKLAKYGEQILEVLAGGPTPAATAGAAATAETPGAGTPGAAGPGAAAPAGAPAGATAV
GAAPTSVFEEDEALPEPPDDIDW
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgtggaaggcgacgtggacgtggacgtggcgagtggcccggaggcgggcgaggcg
gtgcagacgctgcgccgggtcttcgggtacgacgcgttccgcggggatcaagaggagatc
atcgagcaggtgatcgggggcggggacgccgtggtcctgatgcccacgggcggcgggaag
tcgctgtgctaccagatcccctcgctggtgcggccgggtgtcggggtggtcatctcgccg
ctgatcgcgttgatgcaggaccaggtcgatgcgctgcgggcgctgggggtgcgggccggg
ttcctcaattcgacgcaggacttcgaggagcggcggctgatcgaggccgagttcctcgcc
ggcgagctggacctgctgtacctggcgccggagcggctgcgggtcgagcagacggtgcag
ctgctggaccgggggaagatctcgctcttcgccatcgacgaggcgcactgcgtggcgcag
tggggccacgacttccggcccgactacctgatgctgtcgatgctgcacgaccgttggccg
gacgtgccgcggatcgcgctgaccgcgacggcgacgaaggcgacgcacgaggagatcacg
tcccggctgcggatggacggggcccggcacttcgtggcgagcttcgaccggcccaacatc
cagtaccggatcgcggccaagagcgagcccaagcggcaactgctggagctgctgcgcggt
gagcacgccggggacgcgggcatcgtgtactgcctgtcccgcgcctcggtggagaagacc
gcccagttcctggtggacaacgggatcgacgcagtgccttaccacgcggggctggacgcc
cgggtacgggcggccaaccaggcgcggttcctgcgcgaggacggtctggtcgtggtcgcc
accatcgcgttcgggatgggcatcgacaagcccgacgtgcggttcgtggcccatctggac
ctgccgaagtcggtcgaggggtactaccaggagaccggtcgcgccggtcgcgacggccag
ccgtcgacggcctggctggcgtacgggcttcaggacgtggtgcagcagcggaagatgatc
gacgggtcggagggggacgacgcgcaccggcgccggctctccgcccatctggacgcgatg
ctggcgatgtgcgagacggtggagtgccgtcgggtgcggctgctggcgtacttcgaccag
gagagcggtccgtgcggcaactgcgacacctgcctcacaccgccgcagacctgggacggg
acggtgtcggcgcagaagctgctgtcgacggtggtgcggctgaagcgggagcgggggcag
aagttcggggcggggcagatcatcgacatcctgctcggccgaaagaccgccaaggtcatc
cagttcgaccacgacgggctgagcgtcttcgggatcggggaggacctgcgcgaggccgag
tggcggggcgtggtgcggcagttgctcgcccaggggctgctggccgtggagggggactac
gggacgctggtgctcaccgagtccagcggtgaggtgttgcgcgggcagcgccaggtgccg
atgcggcgggagccggagaaggcggcgcgggcggccaaggcgaagtccaagggcaagcgg
gcgccggtggacctgccggaggaggcgctgccggtcttcgaggtgctgcgcggctggcgg
ggcgccacggccaaggagcagggcgtcccggcctacgtgatcttccatgacgcgacgctg
cgggagatcgcgacggcccggccgacgagcctcgccgagctgggcacgctcaccggagtc
ggtgagaacaagctcgccaagtacggggagcagatcctggaggtgctggccggcgggccg
accccggccgcaacggcgggagcggccgcaacggccgaaacgccgggcgcgggcacgccg
ggcgcggccgggccgggcgcggcggctccggccggcgctcccgccggtgcgaccgcggtc
ggcgccgcgccgacgtccgtgttcgaggaggacgaggcgctgcccgagccgccggacgac
atcgattggtga
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