Streptomyces noursei NK660: DC74_5828
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Entry
DC74_5828 CDS
T03082
Name
(GenBank) metallo-beta-lactamase family hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
salu
Streptomyces noursei NK660
Pathway
salu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DC74_5828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salu03019
]
DC74_5828
Messenger RNA biogenesis [BR:
salu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DC74_5828
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AIA06278
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Position
6656776..6658461
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AA seq
561 aa
AA seq
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MSHPHPELGAPPKLPKGGLRITPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFTSIRDRLDDIDGIVLTHGHEDHIGGVPYLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVAEGDRERLGPFECQFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDRRLTDLPAFAKLGEEGIDLLLSDSTNAEVPGFVPPERDISNVLRQVFASADKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARELGYLKVPAGLVVDVKTLDDLPD
DEVVLVCTGSQGEPMAALSRMANRDHQIRIVQGDTVILASSLIPGNENAVYRVINGLSRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPRNLMPVHGEWRHLRANAELGALTGIPKD
RIVIAEDGVVVDMVNGIARIAGKVQAGYVYVDGLSVGDVTETHLKDRRILGDEGIISVFV
VVDSSTGKTVGGPNVHARGSGIDDSAFDAVIPKIDEALSKAAQDGVAEPHQLQQLIRRAV
GKWVSDNYRRRPMILPVVVEV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcatccgcatcctgagctcggcgccccgccgaagctgcccaagggcggcctgcgc
atcacccccctcggtggcctgggtgagatcggccgcaacatgacggtcttcgagtacggc
ggccggttgctgatcgtcgactgcggagtgctcttccccgaggaggagcagcccggaatc
gacctgatcctgccggacttcacgtccatcagggatcgcctcgacgacatcgacggcatc
gtgctcacgcacggccacgaggaccacatcggcggtgtcccctacctcctccgggagaag
ccggacatcccgctgatcggctccaagctgaccctggccctcatcgaggccaagctccag
gagcaccggatccgcccgtacacgctggaggtcgccgagggcgaccgcgagcgcctgggc
cccttcgagtgccagttcgtcgccgtcaaccactccatccccgacgccctcgcggtcgcc
atccgcaccccggcgggcatggtcgtgcacaccggcgacttcaagatggaccagctcccg
ctggaccgccggctgaccgacctcccggccttcgccaagctcggcgaggagggcatcgac
ctcctgctgtccgactccacgaacgccgaggtcccgggcttcgtcccgcccgagcgcgac
atctccaacgtgctgcgccaggtcttcgccagcgccgacaagcggatcatcgtggccagc
ttcgccagccacgtgcaccgcatccagcagattctcgacgcggcccacgagtacggccgc
cgggtcgccttcgtcggccgctcgatggtccgcaacatgggcatcgcccgtgaactgggc
tacctcaaggtccccgcgggcctggtcgtcgacgtcaagaccctcgacgacctgccggac
gacgaagtggtgctggtctgcacgggctcccagggcgagccgatggccgccctgtcccgg
atggccaaccgcgaccaccagatccgcatcgtccagggcgacacggtcatcctggcctcg
tcgctcatccccggtaacgagaacgcggtctaccgggtgatcaacggcctcagccgttgg
ggcgcgaacgtggtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgcaagccgaggaacctcatgccggtgcacggc
gaatggcgccacctgcgcgccaacgccgagctgggcgcactgacgggcatccccaaggac
cgcatcgtcatcgccgaggacggcgtcgtcgtcgacatggtcaacggcatcgccaggatc
gccggcaaggtccaggccggctacgtgtacgtcgacggcctctcggtcggcgacgtcacc
gagacgcacctcaaggaccgccgcatcctgggcgacgagggcatcatctcggtcttcgtg
gtcgtcgacagcagcaccggcaagaccgtcggcggacccaacgtccacgcccgcggctcg
ggcatcgacgactcggcgttcgacgccgtcatccccaagatcgacgaggcgctgtccaag
gcggcccaggacggcgtcgccgaaccccaccagctccagcagctgatccgccgcgcggtc
ggcaagtgggtgtccgacaactaccgtcgccgcccgatgatcctccccgtggtcgtcgag
gtctga
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