Snodgrassella alvi: SALWKB2_0240
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Entry
SALWKB2_0240 CDS
T03063
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
salv
Snodgrassella alvi
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salv03032
]
SALWKB2_0240
03400 DNA repair and recombination proteins [BR:
salv03400
]
SALWKB2_0240
Enzymes [BR:
salv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SALWKB2_0240
DNA replication proteins [BR:
salv03032
]
Prokaryotic type
DNA Topoisomerases
SALWKB2_0240
DNA repair and recombination proteins [BR:
salv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SALWKB2_0240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Motif
Other DBs
NCBI-ProteinID:
AHN27622
LinkDB
All DBs
Position
291775..294069
Genome browser
AA seq
764 aa
AA seq
DB search
MAKNLLIVESPSKAKTLKKYLGSDFEILASYGHVRDLVPKSGAVDPENDFAMKYQLVSRN
AKHLDAIVAAAKEADALYLATDPDREGEAISWHLQEILKSKRGLKNLQPKRVVFHEVTKK
AVLDAVAHPRELSQTLVDAQQTRRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRMIC
EREEEIREFTAQEYWTVHLDSHKARTKFTAKLTHWQGQKLEQFDIPDEERQQGIVSALAG
QPAHVSNVEKKKRSRNPAAPFTTSTMQQEAVRKLSMTTDRTMRTAQQLYEGVDVGQGAVG
LITYMRTDSVSLSDEAVTEIRHYIDNKIGNEFLPSSPKIYKTKSKNAQEAHEAIRPTSVY
RTPEAVKPFLTADQFRLYQMIWQRAVACQMAPARFDTTSVDIVVGKGIFRVTGQVQIFAG
FLSVYEEGVDDSEEDENAKKLPELHEGDSLPVDRIFGEQHFTQPPPRYSEASLVKALEEY
GIGRPSTYASIISTLKEREYVTLEQKRFMPTDTGEVVNKFLTEHFGQYVDYNFTARLENQ
LDDIAGGKREWKPVMQQFWKGFDKEIKAKEDIPRAELTAENLDEICPKCGTHQLQIKFGK
RGRFIACSGYPECDYTRNVNETAEEAAKAAEEPTVVEGRVCPKCEGQLVYKRGRYGKFIG
CSNYPKCKYIEPLEKPKDTGIECPKCHKGSLIERKSRYGKLFYSCNTYPDCDYAVWNPPV
KESCPQCGWPIMTIKTTKRRGTEKVCPQKECGYTEQIEPPAPKE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaacctgttgattgttgaatctccatctaaagcgaaaacgctgaagaaatat
ttaggtagcgattttgaaattctcgcttcctacggtcacgtgcgtgatctggttcccaaa
agcggtgcagtggatccagaaaatgactttgctatgaaataccagttagtaagtcgtaat
gccaaacatctcgatgcaattgtggctgcagctaaagaggctgatgcattgtatctggct
accgacccggatagggaaggtgaagccatctcatggcatttgcaggaaatactgaaatcc
aaacgcggtctgaaaaacctgcagccaaagcgggtagtgtttcatgaagtgaccaaaaaa
gctgtactggatgcagtagctcatccgcgtgaattgtcacaaacgctggtagatgcgcag
cagacgagacgggcactggattatctggtaggttttaatctgtcacctttattgtggaaa
aaaattcgtcgtggtttatctgctggcagagtacaaagcccggcattacgcatgatttgt
gaacgagaagaggaaatccgcgagtttactgcacaggaatactggactgtacaccttgac
agccataaagcacgtactaaatttaccgctaaactaactcattggcagggacagaagctg
gaacaatttgacattcctgatgaggaacgtcagcaaggtatcgtttctgctttggccggt
caaccagctcatgtatctaacgtagaaaagaaaaagcgcagccgtaatcctgctgctcca
tttactacctcgactatgcagcaggaagcagtacgtaagctgagtatgaccactgatcgt
accatgcgtaccgcacagcagttatatgaaggtgtggatgtcggacaaggagctgtgggt
ctgattacgtatatgcgtaccgattcggttagtctctcagatgaagctgtaacagaaata
cgtcattatattgacaacaaaatcggtaatgaatttttaccttcatcgcccaaaatatac
aaaaccaaatctaaaaatgcacaggaagcgcatgaggctattcgtcctacctcagtatat
cgtacgccagaagcagtaaaaccatttctgactgccgaccagtttcgcctgtatcagatg
atatggcagcgggcagtggcctgtcagatggcgcctgcacgctttgatactaccagtgtt
gatattgttgtgggtaaaggtatcttcagagtaaccggacaggtacaaatttttgccggt
ttcctcagtgtctatgaagagggtgtggacgacagcgaagaagatgagaatgccaaaaaa
ttgccggaactacatgagggtgacagtttgccggttgacaggatttttggcgagcagcat
tttacccagccgccaccacgttattctgaagccagtctggtcaaagcactggaagagtat
ggtattggtcgcccatcaacctatgccagtattatttccacactaaaagagcgggaatat
gttactctggagcagaaacgttttatgcccactgataccggtgaagtggttaataaattt
ctgaccgaacatttcggtcagtatgtggattataactttactgccagactggaaaatcag
ctggatgatatagccggcggtaaacgggaatggaaacccgtaatgcagcagttctggaaa
ggctttgataaagaaatcaaagctaaggaagatataccccgcgcagaattaactgccgaa
aatctggatgaaatctgtcctaaatgcggtacccaccaattacaaattaaatttggtaag
cgcgggcgttttattgcatgcagcggttatccggaatgtgactacacccgcaatgttaat
gaaacagccgaggaagcagcaaaggcagcggaagaaccgacagttgtagaagggcgggtt
tgtccgaagtgtgaaggacaactggtatataaacgcggacgttacggcaaatttatcggt
tgttccaattatcctaaatgtaaatatattgaaccgcttgaaaagccaaaagacactggt
attgagtgccctaaatgtcataaaggcagtctgattgagcgtaaaagtcgttatggtaaa
ttattttacagttgtaatacttatccggactgtgattatgctgtctggaatccgccggtt
aaagaaagctgtccgcagtgtggctggccaataatgaccatcaaaacaactaagcggcgt
ggaactgaaaaagtgtgtccgcaaaaagagtgcggttataccgagcagattgaaccacct
gcaccaaaagaataa
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