Snodgrassella alvi: SALWKB2_0258
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Entry
SALWKB2_0258 CDS
T03063
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
salv
Snodgrassella alvi
Pathway
salv00300
Lysine biosynthesis
salv00470
D-Amino acid metabolism
salv01100
Metabolic pathways
salv01110
Biosynthesis of secondary metabolites
salv01120
Microbial metabolism in diverse environments
salv01230
Biosynthesis of amino acids
Module
salv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SALWKB2_0258
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SALWKB2_0258
Enzymes [BR:
salv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SALWKB2_0258
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF4749
Motif
Other DBs
NCBI-ProteinID:
AHN27640
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All DBs
Position
complement(315512..316738)
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AA seq
408 aa
AA seq
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MTNSLKCEQVPYSVLAAQYGTPLYVYSQKAITDAFNLYQQAFADLKPLICYAVKANGNLS
ILRYFASLGCGFDIVSGGELERVLLAGGAADKIIFSGVGKSSAEIEFALKNNIRCFNVES
LAELERINSIAQRLNKIAPVSLRINPDVDAHTHPYISTGLKANKFGIASQDALAAYQLAA
TLPHLKITGIDCHIGSQLTDLSPLIEALQRLLVLVDKLDELGIRIEHIDLGGGIGIVYQN
ENVPDLNAYAAAVSKLLSGRNLPLILEPGRSLIGNTGSLLTTVEYIKQGEEKNFVIVDAA
MNDLMRPSLYQAYHNIINASPTTVDKFVADVVGPICETGDFLAKDRTIAAKAGDLLLIQS
AGAYASSMASNYNTRCRAAEVLVNGTEHHLIRERETIDSLLATETACL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgactaattccctgaaatgtgaacaagtaccctactctgtactggctgcacagtatggt
acaccattatatgtttatagccagaaagcaataactgatgcttttaatctttatcaacag
gcttttgccgatttaaaacctttaatatgttacgcagtcaaagccaatggaaatttatct
attctgcgctattttgccagtctgggctgcggttttgatatcgtttcaggcggagaatta
gagcgggtattactggctggcggagctgccgacaagatcatcttttctggtgtaggcaaa
agcagtgctgaaattgaatttgccctgaaaaacaatattcgctgttttaatgttgaatca
ctggctgagctggaacgtattaatagtattgcccagcgtctgaataaaattgccccggta
tcattgcgtattaatcctgatgttgatgctcatacccatccatatatttctactgggtta
aaagccaataaattcggaattgccagtcaggatgcattagcagcatatcagcttgctgct
acgttaccgcacttaaaaatcacaggaattgactgtcacattggctcacaactaactgat
ttatcacctttaatcgaagcattacaacgattattagtactagtagacaaactagacgaa
ctgggaatccggatagagcatattgatttgggtggtggcataggtattgtttatcaaaac
gaaaatgtgcctgatctgaatgcttatgcagcagcagtcagcaaattgttatccgggcgt
aacctgccattaatactggaacccgggcgcagtctgattggtaatactggcagtttgctc
actacagttgaatacattaaacaaggtgaagaaaagaactttgtgattgtagatgcggcc
atgaatgatctgatgcgaccttcactatatcaggcctatcacaatattattaacgccagt
ccgacaacagtagataaatttgttgctgatgtcgtcggaccaatttgcgaaaccggagat
tttctggctaaagaccgaaccattgcagctaaagcaggtgatttactgttaatacaaagt
gccggggcatatgcttccagtatggcaagtaactataacactcgctgtcgtgccgctgag
gtattggttaatggtacagaacatcatctgattcgagagcgagaaacaattgacagtctg
ttggctaccgaaacagcatgcttatga
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