Snodgrassella alvi: SALWKB2_0266
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Entry
SALWKB2_0266 CDS
T03063
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
salv
Snodgrassella alvi
Pathway
salv03030
DNA replication
salv03430
Mismatch repair
salv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SALWKB2_0266
03430 Mismatch repair
SALWKB2_0266
03440 Homologous recombination
SALWKB2_0266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salv03032
]
SALWKB2_0266
03400 DNA repair and recombination proteins [BR:
salv03400
]
SALWKB2_0266
Enzymes [BR:
salv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SALWKB2_0266
DNA replication proteins [BR:
salv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SALWKB2_0266
DNA repair and recombination proteins [BR:
salv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SALWKB2_0266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHN27648
LinkDB
All DBs
Position
complement(322388..323806)
Genome browser
AA seq
472 aa
AA seq
DB search
MSIVTNDDAAAFAELAAVFCTLPLPVAIVDLETTGGHFAQDRITEIAILRFHQGCISRHQ
WLVNPQQPISDFITKLTGISNEMVQDAPSFTDIAGELLPLLRGHLLVAHNSRFDYTFLRH
AFARNNINFAAPTLDTVPFSRKLYPQHFKHNLDAIIARFEIDLNAADRHRAMGDVLALTE
FLQRSLREHDNALWQSQWRAMIKPGYFPAWLKPELRQQLYALPDSSGLLLQHTPNQPESL
MIVERAFTDICIQFQRQNTQSYWKNTTEINFIPAVSSLHALWLYGYYQLHPQTQTHLSKS
SSPANWYTVSFVANQRGQLQARIIRLQEEILRHPPYGLFAHPRAAKRALSDWARRYDLCP
AVLDILPQSISIHEPCPKQAAHLCDGHCRKETAMDEQNDKVIQYAPLLPVCDWGKWHQIR
VTDTDTVTDTNVTIEAQAGCIRLDDQHWYFHPLLPKLLKQRLKKPENIEFIR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgttaccaacgatgacgccgctgcatttgccgagctggcagcggttttttgt
acgctgcctctgcctgttgccatagtcgatcttgaaaccaccggtggccatttcgctcag
gaccggattactgaaatcgctattttacgttttcatcagggttgtatcagccgacatcaa
tggctggttaatccgcagcagccaatcagtgattttattactaaattaacaggtatcagc
aatgaaatggtgcaggatgcaccgagctttaccgacattgctggcgagcttctaccttta
ctgcgcgggcaccttctggtcgcacataatagtcgctttgattacacttttttgcgtcat
gcttttgcacgcaataatattaattttgcagcaccaacacttgatacagtccccttttca
cgaaaattatacccgcagcatttcaaacataatctggatgccattattgctcgtttcgag
attgatctgaacgcagccgaccgccatcgtgccatgggtgacgttcttgctttaactgag
tttttacagcgcagcttgcgtgagcatgataatgccctttggcagtctcagtggcgggca
atgattaaaccgggttatttccctgcatggcttaaacctgaattacgtcagcaattatat
gctctgccagacagctccggacttctgttacaacatactccgaatcagcctgaatcttta
atgatagtggaacgggcttttaccgatatatgtatacagtttcagcgccaaaatacacaa
agctactggaaaaatactacagaaattaattttattcccgctgtcagctctttgcatgca
ttatggctatatggttactatcagttgcacccacaaacacagacacatttatccaaatct
tcctcacctgctaactggtatacggtttcttttgtagccaatcagcgcggacaattacag
gcaagaattattcggctacaggaagaaatattgcgacatccgccttacggattatttgct
catccgcgtgcagcaaaacgtgcattatctgactgggcacgccgctatgatctgtgccca
gcggtactggatattctgccgcaaagcatcagcattcatgagccatgtccgaaacaggct
gctcatttatgtgatggtcactgtcgtaaagaaacagctatggatgaacaaaatgacaaa
gttatccaatatgcgccattgttaccggtttgcgactggggcaaatggcatcagatacgt
gttactgacacagataccgtaactgatacgaatgtgacgattgaggctcaggcaggctgt
atccggctggatgaccagcactggtattttcatcctcttttacctaaactacttaaacag
agattgaaaaaaccggaaaatatcgaatttatacgctaa
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