Snodgrassella alvi: SALWKB2_0344
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Entry
SALWKB2_0344 CDS
T03063
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
salv
Snodgrassella alvi
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salv02000
]
SALWKB2_0344
Transporters [BR:
salv02000
]
Other transporters
Pores ion channels [TC:
1
]
SALWKB2_0344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AHN27726
LinkDB
All DBs
Position
complement(414456..416537)
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AA seq
693 aa
AA seq
DB search
MHYRDKSLFFLALSCLISTVRAQPQSENTEPHTAELSPIVVVASKQNTPGVEVINPKTAL
QPLPAQDGADLLKSVAGMNVTRKGGSSGDPLLRGLGGSRLLISADDQFVLGGCPGRMDPP
TSYLFPASYDRVIITKGPQAVNQGPGMISGSVRFIRDEKPLSQPTAKLDSAFTKGSFGRS
DAYIDGTLGNQYGWLRLNASHNESKDYKDGNGDTIHSAFKRNNQMAQAALTPFTDTLLAV
QYEHSTGHARYADRSMDGTQFDRHGWSMKLRQQNITNWLSQLQFEYGRSKIDHVMDNFSL
RTPAPMKMASGMSKMASDMPNMNGMHTTMPVRRMYSVMNPSREIKSAKFSAQIELGNTHS
EIGADWQNDEVSTRPMVMSTNKQQAENYYKLPFIWNQTYKRHGAYIQSEWNINDNNSLFG
GFRHDWTSTLFNPQKNAIASKYLHQHQGLNAGFIRLEHRNNKLTSYLGYGIAERAPDYWE
RSKANGEKLRKETNHEIDAGLSYQGNSISSSIDIFAGQINDFILIESINSKNSARQIDAR
RYGFEARTNWQFAPHWNLGGSLAYTYASNRSDKRPLAQTPPLEWRTYLNWENEHFSAGAL
WRVATSQHRYAKNQGNIVGMDLGQSSGFGTLALNAGWKPGKNMLVQIGIDNVFNKTYAEA
VNKSAYDFDTYSVQQYRVNEPGRTLWARAQIKF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcattatcgtgacaaatctctttttttcttagccctgtcctgtctcatttctacagtt
cgtgcccagccacaatcagaaaacacagaaccgcatacagcagaattaagtccgatagtg
gtggtcgcttcaaaacaaaatacaccgggtgttgaagtaatcaaccccaaaacagccctt
cagcctttaccggcacaggacggtgctgatttacttaaatcagttgcaggaatgaatgtc
acacgtaaaggtggcagctcaggtgatcctctgctacgcggtttgggcggttcacgcctg
ctgatcagtgctgacgaccagtttgtactgggcggctgtcccggacgcatggacccaccc
acctcctatctgtttccggccagctacgacagagtcattattaccaagggaccacaagca
gttaatcaggggccgggaatgattagcggttctgtacgttttatccgtgatgaaaaacca
ttatctcagcccacagccaaattagacagtgcctttacaaaagggtcattcgggcgcagt
gatgcttatatcgacggtacactgggtaatcagtacggctggctgcggcttaatgccagt
cacaatgagtctaaagattacaaagacggtaatggagacaccattcattctgcattcaaa
cgcaataatcagatggctcaggcagctcttaccccatttactgacaccctgctggctgta
caatatgaacacagcaccggccatgcccgctatgccgaccgcagcatggacggcacccag
ttcgaccgccatggctggtcaatgaaattgcgccagcaaaatatcaccaactggctgagt
cagctacagtttgaatatggtcgcagcaaaatcgaccatgtgatggataatttcagtctg
cgtactcctgcaccgatgaaaatggcttccggtatgagcaaaatggcatcggatatgccc
aatatgaatggtatgcataccaccatgccggtacgccgcatgtattcagtaatgaatcct
tcgcgtgaaataaaatcagctaaattttcagcacaaatagagctgggaaatacacacagt
gaaatcggtgcagactggcagaatgatgaagtcagcacccggcctatggtaatgagtacc
aataaacagcaggcagaaaattattacaaactgccctttatctggaaccagacttataaa
cggcacggtgcctatattcagagtgaatggaatataaatgataataacagtctctttggc
ggttttcgtcatgactggaccagtaccctatttaatccgcagaaaaatgccattgcctca
aagtatttgcaccagcatcagggactgaatgccggctttatccgtctggaacaccgcaac
aataaactaaccagctatctcggctatggtattgccgagcgtgctcctgattactgggaa
cgcagtaaagccaacggcgaaaaattgcgtaaggaaaccaaccatgaaatcgatgccggt
ttaagctatcagggtaacagcatcagcagctcaattgatatttttgcaggacaaatcaat
gattttattctgattgaaagcattaacagcaaaaattcagcccgtcagatagatgcgcgc
cgctatggcttcgaagccagaaccaactggcagttcgcaccacactggaatcttggcggc
agcctcgcctatacctatgccagtaaccgcagtgataaacgaccactggcacaaaccccg
ccactggaatggcgtacttacctcaactgggaaaacgagcatttcagcgccggtgccttg
tggcgtgttgctaccagtcagcaccgctatgccaaaaatcagggcaatattgtcggcatg
gacttaggtcagagcagcggctttgggacactggcattaaatgccggctggaaacccggt
aaaaatatgctggtacaaatcggtatcgacaatgtttttaacaaaacctatgccgaagca
gtaaataaatctgcttatgatttcgacacctattccgtacaacaataccgtgttaacgag
ccaggacgtacactgtgggcacgggcacagattaaattctga
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