Snodgrassella alvi: SALWKB2_0598
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Entry
SALWKB2_0598 CDS
T03063
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
salv
Snodgrassella alvi
Pathway
salv00260
Glycine, serine and threonine metabolism
salv00460
Cyanoamino acid metabolism
salv00630
Glyoxylate and dicarboxylate metabolism
salv00670
One carbon pool by folate
salv00680
Methane metabolism
salv01100
Metabolic pathways
salv01110
Biosynthesis of secondary metabolites
salv01120
Microbial metabolism in diverse environments
salv01200
Carbon metabolism
salv01230
Biosynthesis of amino acids
salv01240
Biosynthesis of cofactors
salv04981
Folate transport and metabolism
Module
salv_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SALWKB2_0598
09102 Energy metabolism
00680 Methane metabolism
SALWKB2_0598
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SALWKB2_0598
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SALWKB2_0598
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SALWKB2_0598
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SALWKB2_0598
Enzymes [BR:
salv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SALWKB2_0598
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AHN27980
UniProt:
X2H6A3
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All DBs
Position
complement(656271..657521)
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AA seq
416 aa
AA seq
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MFSKALTIEKFDPELAGAIAREDQRQQDHVELIASENYVSCAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDEVEQLAIDRLKELFGASYVNVQPHSGSQANQAVYASVLQPGDTILGMS
LAHGGHLTHGASVNISGRLYNAITYGLDENEILDYKQVEQLALEHKPKMIVAGASAYALE
IDWARFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVPFADFVTTTTHKTLRGPRGGVIM
CRSDEHAKALNSAIFPCLQGGPLMHVIAAKAVAFKEALQPEFKQYARQIKANAKVLAETL
IERGLRIVSGRTESHVFLVDLQPKKLTGKTAEAVLGKAHITVNKNAIPNDPEKPFVTSGI
RLGTAAITTRGFTETDTRELGHLIADVLDNADNEKVISEVSEKIQKICNRLPVYGK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaaagcgttaaccatcgaaaaatttgatccggaactggccggtgccattgcc
cgtgaagatcagcgccagcaagatcacgtagaactaattgcatcagaaaactacgtaagc
tgcgccgtaatggaggctcagggcagccagctaaccaataaatatgccgaaggctatccg
ggtaaacgttattatggtggctgcgaatatgttgatgaagtagaacagctggctatcgac
cgcctgaaagaattatttggcgccagttatgtcaatgtacagcctcattctggttctcag
gccaatcaggccgtttacgccagcgtattacaaccaggcgacactattctgggcatgtct
ctggcgcatgggggccatctgactcacggagccagtgtcaacatttccggtcgcctgtat
aacgccattacctatggtttggatgaaaatgaaatcctcgactacaaacaggtggaacag
ctggcattggagcataagccgaaaatgatcgtggccggtgcttccgcttatgctctggaa
atagattgggcacgtttccgtgagattgcagataaagtaggtgcttatctgtttgtagac
atggcgcattacgccggtctggtcgctggcggagagtatccgaatccggtgccttttgct
gattttgtgaccactactacccataaaactctgcgcggaccgcgcggcggtgtaattatg
tgccgcagcgatgaacatgcaaaagcactgaattcagctattttcccgtgcctgcaaggt
ggtccgttaatgcatgtgattgcagccaaagcagtagccttcaaagaagccttacaacca
gaattcaaacaatacgcccgtcagattaaagctaatgccaaagtactggcagaaaccttg
attgaacgtggtttgcgtattgtttcaggccgtactgaaagccatgtatttctggtagac
ctgcaaccaaaaaaacttaccggtaaaacggcagaagcggtgctgggcaaagcacatatt
accgttaataaaaatgccatccctaatgatccggaaaaaccatttgtcacttctggtatc
cgtttaggcacggcagcgattactactcgcggctttactgaaacagatacgcgtgaactt
ggtcatctgattgctgatgttctggataatgcagacaatgaaaaagttatttcagaagtc
tcagaaaaaatacagaaaatttgcaatcgtttacctgtatatggtaaataa
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