Snodgrassella alvi: SALWKB2_0679
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Entry
SALWKB2_0679 CDS
T03063
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
salv
Snodgrassella alvi
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salv03016
]
SALWKB2_0679
Enzymes [BR:
salv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SALWKB2_0679
Transfer RNA biogenesis [BR:
salv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SALWKB2_0679
Prokaryotic type
SALWKB2_0679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
PTR
Motif
Other DBs
NCBI-ProteinID:
AHN28061
LinkDB
All DBs
Position
739576..740499
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AA seq
307 aa
AA seq
DB search
MNTQTSRRKRVLNGVLLLDKDSGMSSNSALQRARFLYGAAKAGHTGVLDPLATGLLPVCF
GEATKFAQYLLDADKAYIATLQLGAATSTGDAEGEIVATADTVITLAQVQAAISAFSGEI
TQTPPMYSAIKYQGKPLYEYARAGITIERKSRQVTIYQIDIIEFTFPRLVISVRCSKGTY
IRTLAEDMAKHMGTVAHLTALRRTATAGFTIEQTHSLAAISNLDETARDNWLLPCDVLVQ
HFPAVTLNDKDILQLQHGIAVHSEQNYGTMCPLRIYAVDGRFIGLVQYQAASRRLKVLRL
MNTAYIS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccagactagccggcgcaaacgcgttcttaatggtgtgctgttacttgataaa
gacagcggaatgagtagtaacagtgctttgcagcgggcgcgctttttatatggtgcggcc
aaagcagggcataccggtgtactggatccgctggcaacaggtttgttacccgtatgcttt
ggagaagcaactaaatttgctcagtatcttctggatgcagataaagcttatatagcgact
ttacagctgggtgcggctaccagcacaggtgatgctgaaggtgaaatcgttgccactgcc
gatacagtgattacactggcgcaggtacaggcagccatttctgcttttagtggtgaaatt
actcagacaccgcctatgtattcagctattaaatatcagggtaagccattatatgaatat
gcccgtgcgggtatcaccatcgaacgtaaaagccgccaggtgacgatttatcagatagat
attattgaatttactttcccgcggctggtcatcagtgtgcgttgcagtaagggaacgtat
atacgtactctggctgaagatatggccaaacatatgggaactgtagcgcatctgactgca
ttacgccgcactgctactgccggctttaccattgaacagactcattcacttgcagcaatc
agtaatctggatgagacagcacgggataactggcttttaccttgtgatgtactcgtacaa
cattttccggctgtcactctgaatgataaagatattttgcagttacagcatggtatagcc
gtgcattctgagcaaaattatggcacaatgtgccccttgcgtatttatgctgtggatggc
cgctttatcgggctggtgcaatatcaggctgccagcaggcgtttgaaagtgctgcgtctg
atgaatacggcttatatcagttaa
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