Snodgrassella alvi: SALWKB2_1065
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Entry
SALWKB2_1065 CDS
T03063
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
salv
Snodgrassella alvi
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salv03400
]
SALWKB2_1065
DNA repair and recombination proteins [BR:
salv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SALWKB2_1065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
GvpD_P-loop
Lon_C
RecA
AAA_14
AAA_24
AAA_16
AAA_30
ABC_tran
Rad51
Elong_Iki1
AAA_5
nSTAND3
AAA
NTPase_1
SLFN-g3_helicase
AAA_19
DAP3
DUF7125
MCM
NACHT
TniB
ATPase_2
KdpD
HypA
AAA_29
DUF7129
Zeta_toxin
Zn_ribbon_6
DZR
AAA_28
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
AHN28447
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All DBs
Position
1179229..1180602
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AA seq
457 aa
AA seq
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MVKQKTQFQCRSCGGSSPKWQGRCPHCGEWNTLEETTVLSAPSSGSRFQSWASSESAVQL
LAEVSAVEIQRTPTGMGELDRVLGGGLVDGAVILLGGDPGIGKSTLLLQTIALMAEQESV
LYVSGEESAQQVALRAQRLGVHADKVHLLAEIRVEAISAVIARQKPRVVVIDSIQTMYSD
GITSAPGSVSQVRECAAQLTRLAKQQGISMLLVGHVTKDGAIAGPRVLEHMVDTVLYFEG
ETHSNYRMIRAIKNRFGAANELGVFAMTEKGLKGVSNPSALFLSSYRDDVPGSCVLVTQE
GSRPLLVEIQALVDDAHGFAPKRLTVGLAQERLAMLLAVLNRHAGIACYDQDVFLNAVGG
VKITEPAADLAVILAMLSSYRNRPLPEKLIVFGEVGLSGEIRPVPRGQERLREAEKLGFT
HAIVPAANCPKRTADFPRLTIIGVNSVQEGVDATRRD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagcagaaaactcagtttcaatgtcgcagttgtggtggaagctcacctaaatgg
caggggcgttgtcctcattgtggcgaatggaatactctggaagaaacaacagttttatct
gcaccttcttctggcagccgttttcaatcatgggcatcaagtgaatcggcggtacagtta
ctggcagaagtcagtgcggttgaaatacagagaacgccaacaggaatgggtgagctggac
agagtacttggaggtggtttagtagacggagctgttattttgctaggcggagatccgggt
attggtaaatctacattattgctacaaacaatagccttgatggccgaacaggaatccgta
ttgtatgtttccggagaagagtcagctcagcaggttgctttacgtgcacagcgtcttggt
gtacatgcagacaaagttcatttactggcagaaatacgtgtagaggcaatcagtgcagtt
attgcacgccaaaaacccagagtggtagtaatcgattctattcagaccatgtattctgat
ggtattacttcagcacccggttctgtatcacaggttagggaatgtgcagcacaattaacc
cgcctggcaaaacaacagggtatcagcatgttgctggttggtcatgtaaccaaagatggc
gcgattgccggtccccgggtgctggagcatatggtggatacggtattgtattttgaaggg
gaaactcattcaaattatcgtatgattcgtgctattaaaaaccgttttggtgccgctaat
gagttaggtgtttttgcaatgacagaaaaagggctgaagggggtttccaatccttcagca
ttgtttttatccagttatcgcgatgatgttcccggctcatgcgttctcgttactcaggaa
ggttcacgccccttactggtagaaattcaggcacttgttgatgatgctcatggttttgct
ccaaaacgactaactgtagggctggctcaggagcgtctggccatgttgctggctgtgctg
aaccgtcatgcaggtatcgcttgttatgatcaggacgtgtttcttaatgctgtaggtggt
gtgaaaattactgaaccggcagcagatctggcagtgattctggccatgctttcaagctat
cgtaatcgaccattaccggaaaagctgattgtattcggagaagtcgggttatcaggtgaa
attcgtccagttcctcgtggacaggaacgtttgcgagaggcagaaaaacttggatttact
catgccatagtacctgcagctaattgtcccaaacgaacggcagattttccgaggctgact
attatcggggtaaattcggtacaggaaggtgtagatgctacacgacgtgattaa
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