Snodgrassella alvi: SALWKB2_2062
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Entry
SALWKB2_2062 CDS
T03063
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
salv
Snodgrassella alvi
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salv03032
]
SALWKB2_2062
03400 DNA repair and recombination proteins [BR:
salv03400
]
SALWKB2_2062
Enzymes [BR:
salv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SALWKB2_2062
DNA replication proteins [BR:
salv03032
]
Prokaryotic type
DNA Topoisomerases
SALWKB2_2062
DNA repair and recombination proteins [BR:
salv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SALWKB2_2062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHN29444
LinkDB
All DBs
Position
2287596..2290199
Genome browser
AA seq
867 aa
AA seq
DB search
MSDALFAKETIAVSLEDEMRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNEANND
WNRPYKKSARIVGDVIGKYHPHGDTAVYDTIVRLAQDFSMRYLLVDGQGNFGSVDGDSAA
AMRYTEIRMTRIAHELMADIEQETVDFVPNYDGKEQEPAVLPTRIPTLLINGSSGIAVGM
ATNIPPHNINEVIGGAKALLANENLSIDELIDLIPAPDFPTGGIIYGLSGVREGYRTGRG
RVIIRGKTHIEPVGHHDEREAIIIDEIPYQVNKARLVEKIGELVRNKILEGISDLRDESD
RSGMRVVIELKRNENSEVVLNQLYKLTQLQDSFGINMVALVDGQPRLLNLKQILNEFLRH
RREVVTRRTMFNLRKARERGHLLEGLAVALSNVDEIIALIKSSPTPSEAKIALTSRAWRP
DLVKNMLVRSDIDAKLIKPQNLPENTGLSADGYFLSDAQAQAILEMRLQRLTGLEQDKIV
DEYKTILDNIVDLLDILAKPARINQIIHDELTAIQQQFGDERRSEINTFGGDIADEDLIP
KRDMVVTLTHGGYIKTQQADDYQAQRRGGRGKQATATKDEDFIETLFIANTHDYLLCFTS
LGKCHWIKVYKLPEGGRNSRGRPVNNLIQLEEGEKINTILPVREFSENEYVFMCTEQGIV
KKTSLIDFSRPRSAGIIALGLDEGDHLIGAVKTAGKHDIMLFSNGGKAVRFSEDNVRPMG
RSARGVRGMKLAENNQVISLLAYDAEEDSDKLVLTATANGFGKRTAVDDYRRSGRGTQGV
IAIDTGERNGDLVAATLVADSDDLMLITSGGVLIRTKVDQIRSTGRAAAGVKLINLDEGE
KLVSLERIAEAEENSDNEVDILETPEA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcactttttgccaaagaaaccatagcagtatcacttgaagatgaaatgcgc
agttcctatctggattacgccatgagcgtgattgtaggacgtgcccttcctgatgtacgc
gatgggctgaaaccggttcatcgtcgtgtgctgtatgcaatgaacgaagcgaataacgac
tggaaccggccttacaaaaaatctgcgcgcattgtcggcgatgttattggtaaataccat
ccgcacggcgatacagcagtttacgatactatcgtacgtctggcgcaggatttctccatg
cgttatctgctggtcgacggacagggtaatttcggttccgttgatggcgacagtgcagcg
gctatgcggtacaccgaaatccgcatgacaagaattgcgcatgagctaatggctgatatc
gaacaggaaactgttgactttgtcccgaattatgacggcaaagaacaagagccggcggta
ttgccaacacgtattccgacattactgattaatggttcttccggtattgccgtcggtatg
gctaccaacattccgccgcacaatattaacgaagtaataggcggtgccaaagccctgctg
gctaatgaaaacctcagtattgacgagcttatcgatctgattcctgccccggattttccg
actggcggtattatttacggactttcaggcgtacgtgagggttatcgtaccggtcgcggt
cgcgtcattattcgtggtaaaacccatatcgaacctgtcggacatcatgatgaacgcgaa
gcaatcatcattgatgaaattccgtatcaggtaaacaaagccagactagtcgaaaaaatc
ggcgaactagtacgcaataaaattctcgaaggtatttcagacctgcgcgacgagtcggac
agatccggcatgcgtgtggttattgagctcaaacgcaatgaaaatagcgaagttgttctt
aatcagctgtataaattaactcagcttcaggacagtttcggcatcaatatggtggctctg
gtagacggtcagccgcgcctgctgaacctgaaacagattctgaatgaatttctgcgtcac
cgtcgcgaagttgttacccgacgtaccatgtttaatctgcgtaaagcacgtgaacgcggt
cacttgctcgaaggtctggcagtagctctgtctaatgtcgatgaaatcattgccctgatt
aaatcatctcctaccccttcagaagccaaaatcgctttaacctcacgggcatggcgtcct
gatctggttaaaaacatgctcgtacgtagcgatattgatgcaaaattgatcaagcctcag
aatttaccggaaaataccggtctgagtgctgatggctatttcctttccgacgcgcaggca
caggccattctcgaaatgcgtctgcaacgtcttaccggtttggaacaggataaaattgtc
gatgaatacaaaactatccttgataatattgtcgacttacttgatattcttgccaaaccg
gctcgtatcaaccagattattcatgatgagctgaccgccatccagcaacaattcggagat
gaacgtcgcagcgaaatcaacacttttggtggcgacattgccgatgaagacctgataccg
aaacgtgacatggtggttacactgactcacggcggctatatcaaaacccagcaggcagat
gactatcaggcacaacggcgtggcggtcgcggtaaacaggcaactgccaccaaagatgaa
gactttattgaaactctgtttatcgccaacacacacgactacctgctgtgtttcaccagt
ctgggtaaatgccactggattaaagtatacaaactgcctgaaggcggccgcaacagccgt
gggcggccggttaacaacctgattcagctcgaagaaggtgaaaaaattaacaccattctg
ccggtacgtgaattcagcgaaaatgaatacgtctttatgtgtactgaacagggtatcgtt
aagaaaacatcactaatcgatttttcacgtccgcgctcagctggcattatcgctcttgga
ttagatgaaggtgaccatctgattggtgcggttaaaactgccggtaaacacgacatcatg
ttgttttccaatggtggtaaagcagtccgtttcagtgaagacaatgttcgtccgatggga
cgcagtgcccgcggcgtacgcggcatgaaactggctgaaaataatcaggtaatcagcctg
ctggcctatgatgctgaagaagatagcgacaaactggtactgaccgccacagccaacggc
tttggtaaacgcactgctgttgatgactaccgtcgttccggccgtggtactcagggcgta
attgccatcgataccggtgaacgtaatggtgacctagtagccgctacactcgtagccgac
agcgacgacctgatgctgattaccagtggcggtgtactgattcgtaccaaagtcgatcag
atccgttccactggtcgtgctgctgccggtgttaaactgattaatctggatgaaggtgaa
aaactggtcagtctggaacgtattgctgaagcagaagaaaacagcgataacgaagtagat
atactggagacaccagaagcttaa
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