Snodgrassella alvi: SALWKB2_2285
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Entry
SALWKB2_2285 CDS
T03063
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salv
Snodgrassella alvi
Pathway
salv03420
Nucleotide excision repair
salv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SALWKB2_2285
03430 Mismatch repair
SALWKB2_2285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salv03400
]
SALWKB2_2285
Enzymes [BR:
salv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SALWKB2_2285
DNA repair and recombination proteins [BR:
salv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SALWKB2_2285
MMR (mismatch excision repair)
Other MMR factors
SALWKB2_2285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AHN29667
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All DBs
Position
2502209..2504428
Genome browser
AA seq
739 aa
AA seq
DB search
MEILSSAGLLTGLNSEQLAAVTWPAQPALVLAGAGSGKTRVLTTRIAWLLQTGQASVHSI
LAVTFTNKAAKEMQLRLSTLLPVSVRAMWLGTFHGLCHRFLRLHHQEASLPKTFQILDMG
DQLSVVKRLLKQLNIAEEIISPRSLQGFINAQKENGLRASRLSARDPHERQMIECYAAYD
SLCQNEGVVDFAELMLRSYEILQSNEILRNHYQNRFNHVLIDEFQDTNKLQYAWLKLLAG
EHAAVFAVGDDDQSIYRFRGAEVANMTRFLNEFHVGEPIRLEQNYRSVGNILTAANAVIA
HNASRLGKNLRTQAGDGEKIRVLQAINDLEEAQFVVDEVKALHREGLNYMQMAVLYRSNA
QSRVLEQALFRAGIPYKIYGGLRFYERQEIKHALAYLRLAVNPNDDNALLRVINVPARGI
GARSVENIQAAANEAHTSLWQAAISLSVKNSKIAAFIRLIENLQQQAAQVSLQELMAAAI
YDSGLMEHYRTQKGEQQERINNLEELLNAAVAFKPQESGFDMEPEYDENDPLFPVLSFLS
TASLEAGEHQAGQGEDALQLMTVHAAKGLEFDGVFLTGLEEGLFPSEYSMAERDGLEEER
RLMYVAITRARKRLYLTMAEQRLLHGQTHFALPSRFVDEIPEEVLQYLSAHRNSLIARQQ
STQRTNPFHSRSKLAETQESTDFDGFQLGQNVYHERFGTGVIIDATRKAEGARLTINFGK
QGIKELDTVFAKSKLSIIS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttatcttctgccggtctgctgactggtcttaatagtgaacaattagccgcc
gttacctggcctgcgcaaccggcactggtactggcgggtgcaggaagtggtaaaaccaga
gtactaaccacacgtattgcctggttattgcagactggtcaggccagtgtacacagcatt
ctggccgttacctttaccaataaggcggctaaagaaatgcaattgcgcctgagcacgctg
ttaccggtttcggtacgggcgatgtggctggggacatttcacggactgtgccatcggttt
ttacgactgcaccatcaggaagcatcactgcccaaaacatttcagattctggatatgggt
gatcagctttctgtagtcaagcgcttgctcaaacaactgaatattgctgaagaaattatc
tcaccgcgcagtctgcaaggattcatcaatgcacaaaaagaaaacggattgcgtgcttcg
cgtttatcggcccgcgacccgcatgaacggcaaatgattgaatgttatgccgcctatgac
agtttgtgccagaatgaaggggtagtggatttcgcggaattaatgttacgcagttatgaa
attctgcagagtaatgaaatattgcgcaatcattaccagaaccgttttaatcatgtgctg
attgatgaatttcaggatacaaataaattacagtatgcatggctaaaattactggccgga
gagcatgcagcagttttcgccgtgggagacgacgaccagagtatttatcgctttcgcggt
gccgaagtagccaatatgacccgctttctgaatgaatttcatgttggcgaacccatccgg
ctggaacaaaattaccgttcggtaggcaatattctgacagcagccaacgcggtgattgca
cacaacgccagccgtctgggtaaaaatctgcgcactcaggccggcgatggcgaaaaaatc
cgtgtgcttcaggcaattaatgatcttgaagaagcgcagtttgtggttgatgaagtgaag
gctttacaccgcgaagggctgaattatatgcagatggctgtactgtatcgcagtaatgcc
cagtcgcgggttctggaacaggctctgttccgcgccggtataccttacaaaatttatggc
ggcctgcgcttttatgagcgtcaggaaatcaaacatgcactggcttacctgcgtctggcg
gttaaccccaatgatgataatgcattattacgggtaatcaatgtaccggcacgcggtatc
ggcgcgcggagtgttgaaaacattcaggcggcagccaatgaagctcatacttcgttatgg
caggcggccatcagtttatcagtgaaaaacagtaaaattgctgcttttatccgcctgatt
gaaaatttacagcaacaggctgcgcaagtttctctgcaggaactgatggctgctgccatc
tatgatagcggtctgatggaacactaccgtacccagaaaggtgaacagcaggaacgcatc
aacaacctggaagaattactgaatgcggcagtggcatttaaaccgcaggaatccggtttt
gatatggaacctgagtatgatgaaaacgatcctttatttccggtactgtcttttttaagt
acagcctcgctggaagcaggagagcatcaggccggtcagggtgaagatgccttgcagtta
atgactgtgcatgcagccaaggggttggaatttgatggtgtatttctgacagggctggaa
gaaggtttattccccagtgaatacagcatggccgaacgcgacgggctggaagaagagcgg
cgcctgatgtatgtagccatcaccagagcacgaaaacgcctgtatttaacaatggcagaa
caacgcctgttacacggacaaacgcattttgccctgccatcacgctttgtggatgaaata
ccggaagaggtattgcaatatttgtctgctcacagaaactctctgatagcccggcaacag
tcaacgcagcgaaccaatccgtttcacagccgcagcaaactggcagaaacacaggagagt
acggattttgacggctttcagctgggacagaatgtttatcatgaacgtttcggcacaggt
gtcatcatagatgctacccggaaagctgaaggggcacgcctgaccatcaatttcggtaaa
caggggattaaagagctggataccgtatttgccaaaagcaagctaagtattatttcttaa
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