Streptomyces alboniger: CP975_11760
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Entry
CP975_11760 CDS
T06908
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
salw
Streptomyces alboniger
Pathway
salw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP975_11760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salw03019
]
CP975_11760
03009 Ribosome biogenesis [BR:
salw03009
]
CP975_11760
Enzymes [BR:
salw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CP975_11760
Messenger RNA biogenesis [BR:
salw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP975_11760
Ribosome biogenesis [BR:
salw03009
]
Prokaryotic type
rRNA processing factors
CP975_11760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QEV18092
UniProt:
A0A5J6HFS0
LinkDB
All DBs
Position
complement(2659842..2664071)
Genome browser
AA seq
1409 aa
AA seq
DB search
MLEPNEPTEGSQNDTPSDTLPPRRRRRAASRPAGPPAGTTEAAAPAIPATPAAEDVTEAE
KADKAEESAVAATAEAPAPAAEEAAPAPRARRRATRRASAPAGEPKAAEVSEPTAPAAEA
SAPVAEETAEAEEAAPAPRTRRRAARRASAPAGAPQATEVAEAVAVAAEGSVDVEAAPAA
EEEAAPAPRARRRATRRASAPAGEPKAAAEAPAAVEPAPAVAAAEVEEAEPVAEEAAPRR
SRRRATRSASAPAGEPKAAEKPEESTATEQAAQKPAPVEEAPAEPVDDDAPRGRRRRATR
KTAAVGFSAPAGHKARKAQSADASGEGGGRKPRPAVAVFQAPVFAAPMFQTPESAAAAAA
AEAAEESVEEPVQEPAAPVAEETAPRRRRRRRAAEEQPAAVEEREPVKAASAGVEEQPAE
EAEDTAAEQADSDDDAEDSGERQGRRRRRGGRRRRRGELADQDDEQNDTTADSDDETAAE
QAEQDTEDTAEQAAEDAEDDSEDAASENGGSGSSSSRRRRRRRRRAGDSAEGEPGDGDPE
RTVVKVREPRKKEERELGTGVDEVTSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFL
ARREAVERVMVVRQNGERTQIGVLEDNVLVEHYVNKEQATSYVGNVYLGKVQNVLPSMEA
AFIDIGKGRNAVLYAGEVNFEALGMANGPRRIESALKSGQSVLVQVTKDPIGHKGARLTS
QVSLPGRYLVYVPEGSMTGISRKLPDTERARLKTILKKIVPEDAGVIVRTAAEGASEDEL
RRDVERLQGQWEEIQKKAKAISTSSPSLLYGEPDMTVRVVRDIFNEDFSKVIVSGDDAWQ
TIHGYVSHVAPDLADRLSRWTSEVDVFATYRIDEQLAKALDRKVWLPSGGSLVIDKTEAM
IVVDVNTGKFTGQGGNLEETVTRNNLEAAEEIVRQLRLRDLGGIVVIDFIDMVLESNRDL
VLRRLLECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLLESFSETCVHCNGRGVIVHMEQ
PTAAGGGGKRKKRGRGGVDHQDHGHEHEAEGVDDIEAVEAVEQAIETADEIAAEVAAPVA
LPEPEFVPDEELYSSAAEAEAAASRGGRSRRRATRRASAPAGAPRAEAAPAEAPQEEAPK
AEPSKRSGKRAKAAEKAAERAAERAAKAEAQAEAEEQATRAEVPVVGSDAARTAAPAAED
PMVGTPEAVEAAHEAHAEAPAEDAAPKGRTRRRAVRKATSPAGSPKTAQSAEPEAAEVVV
APAPKAEPAAEPVAEPVAEAPVADAAPARPRRRAVRKATAPTASEEAAVVVVPSAEKAEP
VKTEAEKPAAEAEAPAEEAAPAKKTARKAAKKAPAKKTAAKKTAAKKTAAKKTAAKKTTA
KKASKATAKKAAAAEQKPSGVSATASSEG
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagccgaacgaacccactgagggctcgcagaacgacacccccagcgacaccctg
ccgccgcgccgcaggcgccgcgccgcgtcgcgccccgcgggaccgcccgcgggcaccacc
gaggccgcggccccggccataccggccacccccgccgccgaagacgtgacagaggccgag
aaggccgataaggccgaggagagcgctgtggccgccacggccgaggcccccgcgcccgcc
gcggaggaggccgccccggcgccccgagcgcgccgccgcgccacccgccgcgcctccgcg
cccgccggtgagccgaaggccgccgaggtgagcgagcccaccgcgcccgccgccgaggct
tccgcgcccgtcgctgaggagaccgcggaggccgaggaggccgccccggcaccgcgtacg
cgccgtcgtgccgcccgccgtgcctccgcgcccgccggtgccccgcaggccaccgaggtc
gccgaggccgtggcggtcgccgccgagggctccgtggacgtcgaggccgcgcccgccgcc
gaggaggaggccgctcccgcgccgcgtgctcgccgtcgtgccacccgccgtgcctccgcg
cccgccggtgagccgaaggccgccgcagaggcgcccgccgccgtcgagccggcgcctgct
gtggccgccgctgaggtcgaggaggccgagccggtcgccgaggaggccgcaccgcgccgc
tcgcgccgccgcgccacccgtagtgcctccgcgcccgccggtgagccgaaggccgccgag
aagcccgaggagagcaccgccaccgagcaggccgctcagaagcccgcgccggtcgaggaa
gcccccgccgagcccgtggacgacgacgccccccgtggccgtcgccgtcgcgccacccgt
aagaccgcggccgtcggattctccgcgcccgccggtcacaaggcccgcaaggcccagagc
gccgacgcgtccggtgagggcggcggccgcaagccccgtcccgccgtcgccgtcttccag
gcgcccgtgttcgccgcgccgatgttccagaccccggagagcgccgccgcagccgccgct
gccgaggccgccgaggagtccgtcgaggagcccgtccaggagcccgccgcccccgtggcg
gaggagacggccccgcgtcgccgtcgccgccgtcgggccgcggaggagcagcccgccgcc
gtcgaggagcgggagccggtcaaggccgcctcggcaggcgtcgaggagcagccggccgag
gaggccgaggacacggccgccgagcaggccgactccgacgacgacgcggaggactccggc
gagcgccagggccgcaggcgccgtcgcggtggccgccgccgtcgccgcggtgagctggcc
gaccaggacgacgagcagaacgacaccacggccgactccgacgacgagaccgccgccgag
caggcggagcaggacaccgaggacaccgccgagcaggccgccgaggacgccgaggacgac
tcggaggacgcggcctcggagaacggcgggtccggctccagcagcagccgtcgccgtcgc
cggcgtcgtcgccgtgccggtgactccgccgagggcgagccgggcgacggcgacccggag
cgtacggtcgtgaaggtccgggagccgcgcaagaaggaagagcgcgagctcggcaccggc
gtcgacgaggtcacgtccatcaagggctcgacccgcctggaggccaagaagcagcgccgc
cgcgagggccgcgagcagggccgccgccgggtgccgatcatcaccgaggccgagttcctg
gcgcgccgcgaggccgtcgagcgcgtgatggtcgtacgccagaacggcgagcgcacccag
atcggcgtcctcgaggacaacgtcctcgtcgagcactacgtcaacaaggaacaggcgacc
tcgtacgtcgggaacgtctacctcggcaaggtgcagaacgtgctgccctccatggaggcc
gcgttcatcgacatcggcaagggccgcaacgcggtcctgtacgccggtgaggtcaacttc
gaagcgctcggcatggccaacggcccccggcgcatcgagtccgcgctgaagtccggccag
tcggtcctcgtgcaggtcaccaaggaccccatcggccacaagggcgcccgcctgaccagc
caggtctcgctgcccggccgctatctggtctacgtccccgaggggtcgatgaccggcatc
agccgcaagctgcccgacaccgagcgcgcgcgtctgaagaccatcctcaagaagatcgtc
cccgaggacgcgggcgtcatcgtgcgcaccgccgccgagggcgcgagcgaggacgagctg
cgccgtgacgtcgagcgtctccaggggcagtgggaagagatccagaagaaggcgaaggcg
atctccaccagctcgccgagcctgctgtacggcgagccggacatgaccgtccgcgtcgtc
cgcgacatcttcaacgaggacttctccaaggtcatcgtgagcggtgacgacgcgtggcag
accatccacggatacgtctcgcacgtcgcgcccgacctggccgaccgcctctcgaggtgg
acgtccgaggtcgacgtcttcgcgacgtaccgcatcgacgagcagctcgcgaaggccctg
gaccgcaaggtctggctgcccagcggcggctcgctggtgatcgacaagaccgaggcgatg
atcgtcgtcgacgtcaacaccggcaagttcaccggtcagggcggcaacctcgaagagacc
gtgacgaggaacaacctcgaagcggccgaggagatcgtgcgccagctgcggctgcgcgac
ctgggcggcatcgtcgtcatcgacttcatcgacatggtcctggagtccaaccgcgatctg
gtcctgcgccggctgctcgaatgcctcggccgagaccgtacgaagcaccaggtcgccgag
gtcacctcgctcggtctggtgcagatgacccgtaagcgggtcggccaggggctcctggag
tccttctccgagacctgcgtgcactgcaacggccgtggcgtcatcgtgcacatggagcag
ccgaccgccgccggtggcggcggcaagcgcaagaagcgcgggcgtggcggcgtggaccac
caggaccacggtcacgagcacgaggccgagggcgtcgacgacatcgaggccgtcgaggcc
gtcgagcaggccatcgagaccgcggacgagatcgccgcggaggtcgccgccccggtggcg
ctgcccgagcccgagttcgtcccggacgaggagctgtacagcagcgcggccgaggccgag
gccgccgcttcgcgcggtggccgctcccggcgcagggcgacgcggcgggcctcggccccc
gcgggcgctccccgcgccgaggccgctcccgccgaggctccgcaggaggaggctccgaag
gcggagccctcgaagcggtcgggcaagagggccaaggccgcggagaaggcagctgagcgg
gccgccgagcgggccgcgaaggccgaggctcaggccgaggccgaggaacaggccacgagg
gccgaggtcccggtcgtcggctccgacgccgcgcgcaccgcggcgcccgccgccgaggac
ccgatggtcggcacccccgaggccgtcgaggcggcgcacgaggcgcacgccgaggccccc
gcggaggacgccgcgccgaagggacgtacgcgccgtcgtgccgtccgcaaggcgacgtcg
cccgccggttcgccgaagaccgcgcagagcgccgagcccgaggccgccgaggtcgtcgtg
gccccggcgcccaaggcggagcccgccgccgagccggtggccgagcccgtggccgaggcg
cccgtcgccgacgccgccccggcccgtccgcggcgccgtgcggtgcgcaaggccaccgcg
ccgaccgcgtccgaggaggcggccgtcgtggtcgtcccgtcggcggagaaggccgagccc
gtgaagaccgaggcggagaagcccgcggccgaggccgaggctcctgccgaggaagcggct
ccggccaagaagacggcgcgtaaggccgcgaagaaggcgcccgccaagaagacggccgcc
aagaagaccgcggccaagaagaccgcggccaagaagacggccgccaagaagacgacggcc
aagaaggcgtcgaaggcgacggcgaagaaggcagcggcggcggagcagaagccgtccggt
gtctcggccaccgcctccagcgagggctga
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