Streptomyces alboniger: CP975_12345
Help
Entry
CP975_12345 CDS
T06908
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
salw
Streptomyces alboniger
Pathway
salw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP975_12345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salw03400
]
CP975_12345
Enzymes [BR:
salw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CP975_12345
DNA repair and recombination proteins [BR:
salw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP975_12345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
PIF1
AAA_16
PhoH
NPHP3_N
TraI_hel_assoc_N
HTH_IclR
nSTAND3
DEAD
SLFN-g3_helicase
DUF87
UvrD_C
AAA
TrwB_AAD_bind
HTH_29
AAA_28
ATPase_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QEV18185
UniProt:
A0A5J6HMD0
LinkDB
All DBs
Position
complement(2805028..2807271)
Genome browser
AA seq
747 aa
AA seq
DB search
MSSPAVAAAVVEGVLERITYANEETGYTVARVDTGRGAGDLLTVVGSLLGAQVGESLRMQ
GRWGSHPQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDV
IETEPKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYADAS
ISVVRNEPYRLAADVWGIGFLTADRIAQSVGIPHDSPERVKAGLQYALSQSTDQGNCYLP
EERLIADAVKLLQVDTGLVIDCLAELAGEEEGVVREAVPSPEGGEDITAVYLVPFHRAEL
SLAAQLSRLLKAPDDRMPAFRDVAWDKALAWLADRTGAKLAPEQEAAVRLALTRKVAVLT
GGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGADASTVHRLLELKPGGD
AAYDRERPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLRD
MLSEDSPIPAVRLTRIFRQAQESGVVTNAHRINSGVPPLTQGMKDFFLFVEEETEDAGRV
TVDVAAHRIPRKFGLDPRRDVQVLAPMHRGPAGAGNLNGLLQQAITPARPDLPEKRFGGR
VFRVGDKVTQIRNNYEKGQNGVFNGTVGVVTALDADEQRLTVLTDEDEEVPYDFDELDEL
AHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVLVGSRKALGQAV
RTVSAGKRCTALDFRLSGRRGEGPATF
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtccagctgtggcggcggcggtggtcgagggggtcctcgagcgcatcacgtac
gccaatgaggagaccggttacacggtcgcgcgcgtcgacaccggccgcggcgccggcgac
ctgctcacggtcgtcggctccctgctcggcgcccaggtcggcgagagcctgcgcatgcag
ggccgctggggctcccacccgcagtacggcaagcagttcaccgtggagaactacacgacg
gtgctgcccgccaccatccagggcatccgccgctatctcggctccggcctcatcaagggc
atcggccccgtgatggccgaccgcatcaccacccacttcggcgtcgacaccctcgacgtc
atcgagaccgagccgaagcgcctggtggaggtccccggcctcggccccaagcggaccaag
atgatcgccgccgcctgggaggagcagaaggccatcaaggaagtcatggtcttcctccag
ggagtcggcgtctccacctccatcgccgtgcgcatctacaagaagtacgccgacgcctcc
atctccgtcgtgaggaacgagccgtaccgcctggccgccgacgtctggggcatcggcttc
ctcaccgccgaccgcatcgcccagtccgtcggcatcccgcacgacagccccgagcgcgtc
aaggccggtctccagtacgccctttcgcaatccaccgaccagggcaactgctacctcccc
gaggagcgcctcatcgccgacgcggtgaagctgctccaggtcgacacgggcctcgtcatc
gactgcctcgccgagctggcgggagaagaggagggggtcgtccgcgaagccgtgccgagc
ccggagggcggcgaggacatcaccgccgtctatctggtccccttccaccgcgccgaactc
tccctggccgcgcagctgtcgcgcctcctgaaggcccccgacgaccgcatgcccgccttc
cgggacgtcgcctgggacaaggcgctcgcctggctcgcggaccgcacgggcgccaagctc
gcgcccgagcaggaagcggccgtgcggctcgcgctgacccgcaaggtcgccgtcctgacc
ggcggccccggctgcggcaagtccttcacggtccgctccatcgtcgagctggcccgcgcc
aagaaggccaaggtcgtcctcgccgcccccaccggccgcgccgccaagcgcctcgccgaa
ctgaccggcgccgatgcctccaccgtccaccgcctgctcgaactgaaaccgggaggcgac
gccgcgtacgacagggagcggccgctcgacgccgacctggtcgtggtcgacgaggcctcg
atgctcgacctgctcctcgccaacaagctggtcaaggccgtcccgcccggcgcccacctg
ctcttcgtgggcgatgtcgaccagctgcccagcgtcggcgcgggtgaggtgctgcgggac
atgctcagcgaggacagccccatcccggccgtccgcctcacccgcatcttccggcaggcc
caggagtcgggcgtcgtcaccaacgcccaccgcatcaactccggcgtcccgcccctcacc
cagggcatgaaggacttcttcctcttcgtcgaggaggagaccgaggacgccggccgcgtc
acggtggacgtcgccgcccaccgcatcccccgcaagttcgggctcgacccgcgccgcgac
gtccaggtcctcgcccccatgcaccgcggccccgcgggcgcagggaacctcaacggcctc
ctccagcaggccatcacccccgcccggcccgacctgcccgagaagcggttcggcggacgc
gtcttccgcgtgggcgacaaggtcacccagatccgcaacaactacgagaaggggcagaac
ggcgtcttcaacggcacggtcggcgtcgtcaccgccctcgacgccgacgagcagcggctc
accgtcctgaccgacgaggacgaggaagtcccgtacgacttcgacgaactggacgagctg
gcgcacgcgtacgcggtgacgatccaccgctcccagggcagtgaatacccggccgtggtg
atcccggtcaccaccggcgcgtggatgatgctgcaacgcaatctgctctacaccgccgtg
acacgcgccaagaagctggtcgtcctggtcggttcgcgcaaggctctgggtcaggctgta
cgcacggtctccgcgggtaagcgctgtacagccctggatttcaggctctcggggcgccgc
ggagaaggcccggcgacgttttga
DBGET
integrated database retrieval system
