Streptomyces alboniger: CP975_15515
Help
Entry
CP975_15515 CDS
T06908
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
salw
Streptomyces alboniger
Brite
KEGG Orthology (KO) [BR:
salw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salw03016
]
CP975_15515 (thpR)
Enzymes [BR:
salw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CP975_15515 (thpR)
Transfer RNA biogenesis [BR:
salw03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CP975_15515 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QEV18714
UniProt:
A0A5J6HJR6
LinkDB
All DBs
Position
complement(3530296..3530886)
Genome browser
AA seq
196 aa
AA seq
DB search
MRLFAAVLPPDAVTSELAAAAAGLRKLPGAEALRWAPRDSWHFTLAFMAEVPEETVPDLT
ARLERAAHRTPPFALALRGGGHFGDRVLWAGATGDAAALRLLAARADAAARKAGLPREEH
RPYRPHLTLARGGGETDLRPYAEALAPFEGAPWTVQELTLVRSELPRSGVPGERPRYETI
GRWPLGGGARLPGAAG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgcggttctccctccggacgccgtgacctccgaactggccgccgcc
gcggccggtttgcggaagctccctggcgccgaggccctgcgctgggcgccccgcgacagc
tggcacttcacgctggccttcatggccgaggtgcccgaggagaccgtgcctgacctcacc
gcccgcctggagcgggcggcgcaccgcacgccgcccttcgcgctcgccctgcgcggaggc
gggcacttcggggaccgggtgctgtgggcgggggccacgggtgacgcggcggcgctgcgg
ctgctggcggcgcgggcggacgcggcggcgcgcaaggcgggcctcccgagggaggagcac
cggccctaccgcccgcatctcacgctggcgcgcggcgggggagagacggacctccgcccg
tacgccgaagccctcgcccccttcgagggcgcgccctggacggttcaggagctgacgctc
gtacgcagtgagctgccgaggagcggggtgccgggcgagcggccccggtacgagacgatc
gggcgctggccactgggaggcggcgcccggcttccgggggcggccggttaa
DBGET
integrated database retrieval system
