Streptomyces alboniger: CP975_20130
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Entry
CP975_20130 CDS
T06908
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
salw
Streptomyces alboniger
Brite
KEGG Orthology (KO) [BR:
salw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salw03016
]
CP975_20130
Enzymes [BR:
salw01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CP975_20130
Transfer RNA biogenesis [BR:
salw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CP975_20130
Prokaryotic type
tRNA splicing ligases
CP975_20130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QEV19499
UniProt:
A0A5J6HGV4
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All DBs
Position
4495184..4496377
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AA seq
397 aa
AA seq
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MSYVEVPGAKVPIRMWADPASVEESAMRQLQNVATLPWIKGLAVMPDVHFGKGATVGSVI
AMQGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHEDPVEPG
RFHGMATAGWDDFWSRFDGVTEAVKFRQERAAKQMGTLGSGNHFIEFCLDESGSVWLMLH
SGSRNIGKELADHHIGVAQKLAHNQGLVDRDLAVFIAETPQMAAYRNDLFWAQEYAKHNR
ALMMALFQDVVRKEFRKAKVTFDPVISCHHNYVSEERYDGMDLLVTRKGAIRAGGGDFGI
IPGSMGTGSYIVKGLGNEASFNSASHGAGRRMSRGAAKRRFSTKDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVEVVAKLKQVICVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtagaggttccgggtgcgaaggtgccgatccggatgtgggcggacccggcg
tcggtcgaggaatcggcgatgcgccagctgcagaacgtggcgacgctgccgtggatcaag
ggcctggccgtcatgccggacgtccacttcggcaagggcgcgacggtcggctcggtgatc
gccatgcagggcgcggtctgcccggcggcggtcggcgtcgacatcggctgcggcatgtcg
gcggtcaagacctcgctgaccgccaacgacctgccgggggatctgtcgcggctgcgatcg
aagatcgagcaggcgattccggtggggcggggcatgcatgaggaccccgtcgagccgggg
cgcttccacgggatggcgacggcggggtgggacgacttctggtcccgcttcgacggggtc
accgaagcggtcaaattccgtcaggagcgagccgctaagcagatgggaacgctcgggtcg
ggcaaccacttcatcgagttctgtctcgacgagtcgggttcggtgtggctgatgctgcac
tccggttcgcggaacatcggcaaggagctggccgaccaccacatcggcgtggcccagaag
ctcgcgcacaaccagggcctcgtcgaccgcgacctggccgtcttcatcgcggagaccccg
cagatggcggcgtaccggaacgacctgttctgggcgcaggagtacgcgaagcacaaccgc
gccctcatgatggcgctcttccaggacgtggtccgcaaggagttccggaaggcgaaggtg
accttcgatccggtgatctcctgccaccacaactacgtcagcgaggagcggtacgacggg
atggacctgctggtcacccgcaagggcgcgatccgggccggcggcggtgacttcgggatc
atccccggctcgatgggcacgggctcgtacatcgtgaagggcctcggcaacgaggcgtcc
ttcaactcggcctcccacggcgccggccggcgcatgagccggggcgcggccaagcgccgc
ttctcgacgaaggacctggaggagcagacgcggggcgtggagtgccgcaaggactcgggc
gtcgtggacgagatcccgggtgcgtacaagccgatcgagcaggtcatcgatcagcagcgt
gacctcgtcgaggtcgtggcgaagctgaagcaggtcatctgcgtcaaggggtga
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