Streptomyces alboniger: CP975_23900
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Entry
CP975_23900 CDS
T06908
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
salw
Streptomyces alboniger
Brite
KEGG Orthology (KO) [BR:
salw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salw03021
]
CP975_23900
Transcription machinery [BR:
salw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP975_23900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
PF0610-like_N
NirdL-like_HTH
Sigma70_ECF
MarR_2
HTH_24
IF2_N
HTH_3
HTH_Crp_2
DUF7343
HTH_AraC
MarR
HTH_ParB
HTH_19
HTH_28
DUF7342
Motif
Other DBs
NCBI-ProteinID:
QEV20166
UniProt:
A0A5J6HIX1
LinkDB
All DBs
Position
complement(5311334..5312365)
Genome browser
AA seq
343 aa
AA seq
DB search
MRNGDGPVRDEERGTQGLPADGREGVRRMATGIPEQQAKPHPEDLGQPGPLSVADVSEQA
EPTAKDELKQLSGRGGGRRAGNMSEHEHSRHDPRDRSGARAMFIELRTLSDGSPEYAELR
NQLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVV
GEIKRHFRDKGWAVRVPRRLQELRLALTTATAELSQLHGRSPTVHELAEKLAISEEEVLE
GLESANAYSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRIL
LLRFFANMTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaacggggacgggccggtgcgggacgaagagcgcggcacacagggtctgcccgcc
gacggcagggagggggtgcgccgaatggccaccgggatccccgagcagcaggccaaacct
cacccggaggacctggggcagccgggtcctctgtcggtggccgatgtgtcggagcaggca
gagccgaccgccaaggacgagctcaagcagctctccggccggggcggcgggcgacgggcg
ggaaacatgagcgagcacgagcacagccgacacgatccacgggaccgcagcggcgcacgc
gcgatgttcatcgagctgcgcaccctgagcgacggcagtccggagtacgcggagctgcgc
aaccagctggtccgcatgcacctgccgctcgtcgagcacctggcccgccgcttccgcaac
cgcggcgagcccctggacgacctcacccaggtcgccacgatcggtctgatcaagtccgtg
gaccgcttcgacccggagcgcggcgtggagttctccacgtacgcgacaccgacggtcgta
ggcgagatcaagcggcacttccgcgacaaggggtgggcggtccgcgtcccgcggcgtctc
caggagctgcgtctcgcgctgacgacggccacggccgagctgtcccagctgcacggccgc
tcccccaccgtgcacgaactcgccgagaagctggccatctccgaagaggaggtcctggag
ggcctggagtcggccaacgcctactccacgctgtccctggacgtcccggacacggacgac
gagtccccggccgtcgcggacaccctgggcgccgaggacgaggccctggagggcgtcgag
taccgcgaatccctcaagccactcctcgaggaccttcccccgcgcgagaagcgcattctg
ctcctgcgcttcttcgccaacatgacccagtcgcagatcgcgcaggaggtcggcatctcc
cagatgcacgtctcgcgcctgctcgcccgcacgctggcgcagctgcgggagaagttgctg
gtggaggagtag
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integrated database retrieval system
