Streptomyces alboniger: CP975_31845
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Entry
CP975_31845 CDS
T06908
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
salw
Streptomyces alboniger
Pathway
salw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP975_31845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salw03400
]
CP975_31845
Enzymes [BR:
salw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CP975_31845
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CP975_31845
DNA repair and recombination proteins [BR:
salw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP975_31845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_RRN7
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QEV21527
UniProt:
A0A5J6HX01
LinkDB
All DBs
Position
7239656..7240516
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AA seq
286 aa
AA seq
DB search
MPELPEVEALRGFLTEHLVGRAIVRVLPVAISVLKTYDPPLTALEGRTVTAVTRHGKFLD
VDADGLHLVTHLARAGWLQWKDRLPDGTPRPGKGPLALRVALETGEGFDLTEAGTQKRLA
VYVTEAPSKIPGIARLGPDPLAPDFDEERFARLLAGERRQIKGALRDQGLIAGIGNAYSD
EILHAARMSPFKRTSSLTEEEIHGLHRALRDTLTEAVERSRGVAAGRLKAEKKSGLRVHG
RTGEPCPVCGDTIREVSFADSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaagtcgaggcgctgcgaggctttctgacggaacatctggtcggc
cgcgcgatcgtccgtgtgctgcccgtcgcgatcagcgtcctcaagacgtacgaccctccg
ctcaccgccctggagggccgcaccgtcacggccgtgacccggcacggcaagttcctggac
gtcgacgcggacgggctgcacctcgtcacccacctcgcccgcgccggctggctccagtgg
aaggaccggctccccgacggcaccccgcgccccggcaagggcccgctcgcgctgcgcgtc
gccctggagacgggggagggcttcgacctcacggaggcgggcacccaaaagcgcctcgcg
gtgtacgtcaccgaggcgccgtcgaagatcccgggcatcgcgcggctggggcccgatccg
ctcgccccggacttcgacgaggagcggttcgcccgcctcctcgcgggtgaacggcggcag
atcaagggcgcgttgcgcgaccagggcctgatcgccgggatcggcaacgcgtacagcgac
gagatcctgcacgcggcccgcatgtccccgttcaaacggacgtcgagcctcaccgaggag
gagatccacgggctgcaccgggctctccgggacacgctgacggaggcggtggagcgttcg
cgcggagtggcggcgggccgtctcaaggcggagaagaagagcgggctgcgcgtgcacggc
cgcaccggcgagccgtgtcccgtgtgcggcgacacgatccgggaggtgtccttcgccgac
tcctccttgcagtactgcccgacgtgccagacgggcggaaagccgctggccgaccggagg
ctgtcgcggttgctgaagtga
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