Spiroplasma alleghenense: SALLE_v1c02590
Help
Entry
SALLE_v1c02590 CDS
T06597
Symbol
deaD
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
salx
Spiroplasma alleghenense
Pathway
salx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SALLE_v1c02590 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salx03019
]
SALLE_v1c02590 (deaD)
03009 Ribosome biogenesis [BR:
salx03009
]
SALLE_v1c02590 (deaD)
Enzymes [BR:
salx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SALLE_v1c02590 (deaD)
Messenger RNA biogenesis [BR:
salx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SALLE_v1c02590 (deaD)
Ribosome biogenesis [BR:
salx03009
]
Prokaryotic type
rRNA helicases
SALLE_v1c02590 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
P-loop_SecA
Cas3-like_C_2
IspD
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AXK50935
UniProt:
A0A345Z2V6
LinkDB
All DBs
Position
complement(305444..306916)
Genome browser
AA seq
490 aa
AA seq
DB search
MNFNEINLKPQIQKALARHNLTVATEIQEKTIPVALENKDIIGKSQTGTGKTAAFLLPIL
ERITPNVNFVQAIIVTPTRELSLQVLDKVRDLSMYLEGITSTGVTGGANIARQIQALKRT
NIVVGTPGRITDLLNRKVLKLDQVRTVVLDEADEMLKMGFKQDIDNLFSVVPNEHQTLLF
SATMNKQVIEIANKYLKDPVEISVERTALSGANIKQYFIDTKTHNKEDALVAIYNKIKPE
LSIIFANTKSQTEEISNLLYKNGVRSFVINGDKRQSERNRALKAFKTSATKVLVATDVAA
RGIDVPGIDYVINYDLPHDHEYYIHRIGRTARAGSNGNSISLVGNRNNFFHLKDLEKYQN
KEIEKMDIESWELPIVERRSGGGSSRSGGFRGSSNGGGSSNGGGSSRSGGFRGSSNGGGS
SRSFSDSSRSSGPRKDGFSGERSFTKSADFGASGFDKGGAGKDRRKRDFGAGKAKKSFGS
SKSKSKSNWN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaatgaaataaatttaaaaccacaaattcaaaaagcccttgcacgtcataat
ttaactgttgcaaccgagattcaagaaaaaacaataccagtagctttggaaaacaaagat
attattggtaaatctcaaacaggaaccggaaagacagcggcttttttattaccaatcctt
gaaagaataactccaaatgttaattttgttcaagcaatcatcgttacaccaacaagagag
ttgtcactacaagtccttgataaagtacgcgatttatcaatgtatttagaaggtattact
tcaacaggagttaccggaggagcaaatattgctcgccagattcaagccttaaagagaacc
aatattgttgttggtactccaggaagaatcacagatctattaaacagaaaagtattaaaa
cttgaccaagtaagaactgttgtattagatgaagcagacgaaatgcttaaaatgggattc
aaacaagatattgacaatttgtttagcgtagttccaaatgaacaccagactttattattt
tcagcaaccatgaacaaacaagttattgaaattgctaataaatacctaaaagatcccgtt
gaaatctcagttgagagaacagctttaagtggagctaatattaaacagtactttattgat
acaaaaacacacaacaaagaagatgctttagtagctatttataacaaaattaagccagaa
ttaagcattatttttgcaaatactaagtctcaaactgaggaaattagtaatttactatat
aaaaacggagttagaagctttgttattaatggtgacaaacgtcaaagtgagagaaatcgc
gctttaaaagcttttaaaacatcagcaactaaagtattggtagcaactgatgttgctgct
cgtggaattgatgttcctggtattgactatgttattaactatgacttacctcacgatcac
gaatattacattcaccgaatcggaagaacagctcgtgctggttcaaacggtaattcaatt
tcactagttggaaatagaaataacttcttccatttaaaagatttagagaaataccaaaac
aaagaaatcgaaaaaatggatatcgaaagctgagaactaccaattgttgaaagacgcagt
ggtggaggttcatcaagaagtggtggatttagaggttcatcaaatggtggaggttcatca
aatggtggaggttcatcaagaagtggtggatttagaggttcatcaaatggtggaggttca
tcaagaagtttttcagatagcagccgtagttcaggaccaagaaaagacggcttttcagga
gaaagatcatttacaaaatcagcagattttggagcatctggattcgataagggcggagca
ggaaaagatcgtcgcaaacgtgattttggagcaggaaaagctaaaaaaagctttggtagc
agtaaatcaaaaagcaaatcaaactgaaattaa
DBGET
integrated database retrieval system
