Spiroplasma alleghenense: SALLE_v1c04980
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Entry
SALLE_v1c04980 CDS
T06597
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
salx
Spiroplasma alleghenense
Pathway
salx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SALLE_v1c04980 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salx03400
]
SALLE_v1c04980 (xseB)
Enzymes [BR:
salx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SALLE_v1c04980 (xseB)
DNA repair and recombination proteins [BR:
salx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SALLE_v1c04980 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Snapin_Pallidin
DUF6987
Cauli_AT
Sec8_N
RasGAP_C
DUF1664
DUF3450
ATG17_like
KxDL
Spectrin_Anc-1_2
NPV_P10
ERM_helical
EncFtn-like
DUF2508
COG4_N
YkyA
DUF745
Myb_DNA-bind_4
Fib_alpha
DUF3810
XhlA
Fzo_mitofusin
Motif
Other DBs
NCBI-ProteinID:
AXK51172
UniProt:
A0A345Z3J3
LinkDB
All DBs
Position
complement(580625..580843)
Genome browser
AA seq
72 aa
AA seq
DB search
MNELKEKGFDELLNQIKEKINKLDSSQTNMEDSIEIFKESLEIIKEAKDKLENIKGEVKK
VMIDNKIVDFEN
NT seq
219 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattaaaagaaaagggttttgatgaacttttgaaccagataaaagaaaagata
aataaattagactcttctcaaacaaatatggaagattctatagaaatatttaaagaaagt
ttagaaataataaaagaggctaaagataaattagaaaatataaaaggcgaagtaaagaaa
gtaatgatcgacaataaaattgttgatttcgaaaactaa
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