Spiroplasma alleghenense: SALLE_v1c05440
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Entry
SALLE_v1c05440 CDS
T06597
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
salx
Spiroplasma alleghenense
Pathway
salx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SALLE_v1c05440 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salx03400
]
SALLE_v1c05440 (recD)
Enzymes [BR:
salx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SALLE_v1c05440 (recD)
DNA repair and recombination proteins [BR:
salx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SALLE_v1c05440 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
HHH_RecD2
OB_YrrC
SLFN-g3_helicase
HHH_5
AAA_22
nSTAND3
UvrD-helicase
AAA_12
HHH
AAA_7
RsgA_GTPase
DEAD
Mg_chelatase
AAA_28
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AXK51218
UniProt:
A0A345Z3N9
LinkDB
All DBs
Position
complement(628767..630974)
Genome browser
AA seq
735 aa
AA seq
DB search
MNTKVFRGLLIKFLFINEMGWGIGLFLDENNKNQQMRIKGPIGQMRLKVVYEIQGFLDEH
PKYGQSFEVQSFKVADSTTIKQAIAFWTSGLFPTVGAKTAQIIVENLGIDAAKKIRQDPD
LIKTVPGVSEKVAQIIISVVSKVDAEQELLEIFTMNGLKVSFLQSMLKWHEDKNEISAIL
ESNFYDYARKNNFQPFLEVDKVALYFGAEQYGPQRVGAWVYETINNILFTTGDTHTKKNI
LIEEVQKRLAISYDTIMAALVYCKEEKSLIFNDHKIYSFESWNDEELINNNLAKIKKREP
LLNNNQIDFEDLLSQVEKEIGNNFKIDNFHYDEIQISALKAFIHNNIIILTGGPGTGKTM
VINGMVRIFEKIYGSQNFALAAPTGRAASRIQETTGYKATTIHKLLKASGDDSFEVNETN
PIFLDLIILDESSMLSNHLFSDFLRGTGQAKKLVLVGDVDQLPSVGYGNLFEDLIISKNF
PTITLNKIFRQSEQNDIIELAAGISRGDTEEFKTKKLNNIDFLFSDNNQENIENMIKIYQ
NKIATQDVNNINHVQILAPFYKGDLGINIINNIIQENFNKNSKISGKIFKKGETKITTND
KVMYLKNDSVLEISNGDIGIIGLMKFENARFVEAICEFNGRDVNLKNANFAELTLGYGIS
VHKSQGSEYNNVILVLDPSANNHFLSKKIIYTAITRAKEHLYVIGGSQAFWNGLAKTTKP
RNTTLVEKILKINQG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaggtttttaggggattattaattaagtttttattcataaacgaaatgggt
tggggaatcggtttgtttttagatgaaaataacaagaatcaacaaatgcgaattaagggc
ccaattggacaaatgcgcttgaaagtggtatatgaaattcaaggatttcttgatgagcat
ccaaaatatggacaatcatttgaagttcaaagttttaaagtggctgatagcaccacaatt
aaacaggcaatcgctttttgaacttcaggattatttccaactgtgggggctaaaaccgct
caaataattgttgaaaatcttggaattgacgctgctaaaaaaattcgtcaagatcccgat
ttgataaaaactgttccaggggtatctgaaaaagttgctcaaataatcattagtgttgtt
agcaaagttgatgctgaacaagaacttcttgaaatttttactatgaatggattaaaggta
agttttttacaatcaatgttgaaatgacacgaagataaaaatgaaattagcgcaattcta
gaatcaaatttttatgattatgcaagaaaaaataattttcaaccatttttggaagtagac
aaagttgcgttatattttggagccgagcaatatggtcctcaaagagtgggggcctgagtt
tatgagacaattaataatattctatttactaccggcgacactcatactaaaaaaaatatt
ttaatcgaagaagttcaaaagcgattggcaatttcatatgataccattatggcggctttg
gtttattgtaaagaagaaaaatctttaatttttaatgatcacaaaatttactcttttgaa
agttgaaatgatgaggaattaattaataataacttagctaaaatcaaaaagcgcgaaccc
ttgttaaataataatcaaattgattttgaagatttactttctcaagtagaaaaagaaatt
ggtaataattttaaaattgataattttcattatgatgaaattcaaatctcagctttaaaa
gcttttatccataacaatattattattttaaccggagggccaggaacaggtaaaaccatg
gttattaatggaatggttagaatttttgaaaaaatatatggctcacaaaattttgcttta
gccgctccaaccggaagagctgcgagtcggattcaagaaacaaccggttataaagctaca
acaattcataaacttttaaaagcaagtggtgacgatagttttgaagttaacgaaacaaat
ccaatatttttggatttaatcatcctagacgaatcaagcatgttatctaatcacttgttt
tctgatttccttagaggaacagggcaagcgaagaaattagttttagttggtgatgtggat
caactaccaagtgttggttatgggaatttatttgaagacttaattatttcaaaaaacttt
ccaactattacgctaaacaaaatttttcgacaatctgagcaaaacgatattattgagttg
gcagcaggaattagtcgtggggatactgaagaattcaagactaaaaagctaaataatata
gattttctttttagtgataataaccaagaaaacattgaaaatatgataaaaatttatcaa
aataaaatcgcgacacaagatgtaaataatattaatcatgtccagattttagcacctttc
tataaaggagatttagggattaatataataaataatataattcaagaaaattttaataaa
aattcgaaaattagtggtaaaatttttaaaaagggagagacgaaaataactacaaacgat
aaggtgatgtacttaaaaaatgattctgttttagaaatttctaatggtgatattggaata
attggtttaatgaagtttgaaaatgccagatttgttgaagctatttgtgaattcaacggt
cgagatgttaatttaaaaaatgccaattttgctgaattgactttaggttatggaattagt
gtccataaaagtcagggaagcgaatacaataatgtcatcctggttctagatccaagtgcc
aataaccattttttaagtaagaaaattatctacactgctataaccagagctaaggaacat
ttatatgtaattggtggatcgcaagcattttgaaatggtttagccaaaactaccaagcca
aggaatactacattagtagagaaaatattaaaaattaatcaaggataa
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