Spiroplasma alleghenense: SALLE_v1c07400
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Entry
SALLE_v1c07400 CDS
T06597
Symbol
rny
Name
(GenBank) ribonucrease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
salx
Spiroplasma alleghenense
Pathway
salx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SALLE_v1c07400 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salx03019
]
SALLE_v1c07400 (rny)
Messenger RNA biogenesis [BR:
salx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SALLE_v1c07400 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_KhpA-B
dUTPase
SRF-TF
SID-1_RNA_chan
Motif
Other DBs
NCBI-ProteinID:
AXK51410
UniProt:
A0A345Z481
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All DBs
Position
complement(855404..856924)
Genome browser
AA seq
506 aa
AA seq
DB search
MNSRTAVEVIIALTVLFSISIIAILVLCFSQRRQRLIKKAQDEAKKILISATADAKIHSD
ELIFQAEKKIMEKKYEISKLETDLEKKVNEISIQEKNLELKLESLFSKETIASNKYKEYE
KKLEDVISALEIVSNISQEEAKEVLFKSVEHKFTKELNSLIKTKQLEAHNSAKANATELI
VTAMEKYVVDVVAEKTTSFIKLPTNDIKGRIIGKEGRNIKALENFGGVDVIIDDTPNIIT
ISSFNPIRREVATRALNNLIADGRIQPVKIEEEILKQQKEIEQITLEAGTQVIEELGIFN
MDIELIKLIGKLKYRTSYGQNVLFHSIEVAKLAGTIAAELGLNTKLAIRSGLLHDIGKAV
DFEEEGSHVVLGINIAQKYREDKVVINSIASHHGDFPREDLIAAIVSIADSMSAARPGAR
NNSAEDFLNRMSDIEKIAKSVEGVQNAYAIQSGRQIRIIVDPDLVEDWQLVGILNDLQEL
ITKEVIIPGEITMTIIREKREIKIIR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaagaacagccgttgaggttatcattgcactaactgtgctattttccatatcg
attatagcaattttagttctttgctttagccaacgtcgacaacgactaataaaaaaagct
caagacgaagccaaaaaaatcctaatatcagcaactgctgatgcgaaaattcattcagat
gaattaatttttcaagcagaaaaaaagataatggaaaaaaaatacgaaatttctaaacta
gaaacagatttagaaaaaaaagttaacgaaattagtattcaagaaaagaatctagagtta
aagttagagtctctttttagtaaagagacaattgctagtaacaaatataaagaatatgaa
aaaaaattggaagatgtaatttcagcattagaaattgtgtccaatatatcgcaagaagaa
gctaaagaggttctttttaaaagcgttgaacataaatttacaaaggaactaaattcccta
attaaaaccaaacaactagaagctcataatagtgccaaggcaaatgctacagaactaatt
gtaacagcaatggaaaaatatgttgtggatgttgttgcagaaaaaacaacaagttttatc
aaacttccgactaatgatatcaaaggtcgaataattggaaaagaaggccgaaatattaag
gcacttgaaaattttggtggtgttgatgtaattattgatgacaccccgaatataattaca
atttcaagttttaacccaattagaagagaagttgccaccagagctttaaacaatctaatc
gcagatggaagaatacagcctgtaaaaattgaagaagaaattttgaagcagcaaaaggaa
attgaacaaattactttggaagctggtactcaggtcattgaagaattaggtatttttaat
atggacatagaacttattaaattaattggaaaattaaagtaccgcacaagttatggtcaa
aacgttttatttcactcaattgaggtggctaaattagctggaacaattgctgctgaatta
ggactaaataccaaattagcaattagatcgggattattgcatgacatcggtaaagcggtg
gattttgaagaagaaggtagtcatgtagtactaggtattaatattgcgcaaaagtatcgt
gaagataaagttgtaattaattcaatcgcctcacaccacggggatttcccaagagaagat
ttgattgctgcaattgtttcgattgcagattcgatgtctgctgctcgacctggggcgaga
aataattcagcagaagatttcttaaaccgtatgagcgacattgaaaaaattgctaaatca
gttgagggagtccaaaatgcttatgcaattcaatcaggaagacaaattagaattatagtt
gatcctgatttagttgaagattggcaattagtaggaatcttaaatgatttacaagaatta
attactaaggaagttataattccaggtgagataactatgacaattattagagaaaaacga
gaaattaaaataattcgttaa
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