Salinivibrio sp. YCSC6: E8E00_00520
Help
Entry
E8E00_00520 CDS
T05946
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saly03016
]
E8E00_00520 (trmA)
Enzymes [BR:
saly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
E8E00_00520 (trmA)
Transfer RNA biogenesis [BR:
saly03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
E8E00_00520 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Methyltransf_31
Cons_hypoth95
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_12
PrmA
Motif
Other DBs
NCBI-ProteinID:
QCF34790
LinkDB
All DBs
Position
I:complement(114498..115601)
Genome browser
AA seq
367 aa
AA seq
DB search
MTKAHTAVDYDTQLAEKVQRLTTQLAPFHAPELEIFRSPETHYRMRAEFRVWHEGDDLYY
IMFDPATKQKYRVDTFPAASRLINDLMPLLMDAIKPNDALRRKLFQVDFLSTLSGEILVS
LLYHRQLDEEWDEAAQALKQRLNDEGFNLNLIGRARKQKKVLDRDYVLEKLNADGQTLIY
QQIENSFTQPNGPVAEKMLEWAIDCTRDSQGDLLELYCGNGNFSLALAKNFRRVLATELA
KPSVQSAQYNIAANNIDNVQIIRMSAEEFTQAINGEREFRRLKDQGVTLSDYQCNTIFVD
PPRAGMDDETCKMVQGYDRILYISCNPETLVENLERLSQTHRISRCALFDQFPFTHHTEA
GVWLERK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggctcacaccgccgttgactacgacacacagcttgctgagaaagtacaacga
ctcactacccaactcgcgccgtttcatgcgcctgagctagagatctttcgctcaccggaa
acccactatcggatgcgcgcagagtttcgagtatggcatgaaggcgacgacctgtattac
atcatgtttgatcctgcgaccaagcagaaatatcgagtcgatacctttcctgccgcaagc
cgtttgatcaatgatttgatgccgctattgatggatgccatcaagcctaacgacgcgttg
cgacgtaagctcttccaagttgattttctctccactttaagcggtgagatcttggtgtct
ttgctgtatcaccgccagctagacgaagagtgggacgaggccgcgcaagcgcttaaacaa
cgtttgaacgatgagggctttaacctcaacctgattggccgtgcgcgcaagcaaaagaaa
gtgctagaccgcgactacgttttggaaaaactcaatgctgatggtcagacattgatctac
cagcaaattgaaaacagctttacccaaccaaacgggcccgtggcggagaaaatgctggaa
tgggccattgattgcacccgcgatagccaaggtgatttgctggagctgtattgtgggaat
ggcaacttctcactggcattagcgaaaaactttcgccgcgtcctcgccaccgagctggcg
aaaccctcggtacaatcggcgcaatacaatattgccgccaacaacatcgacaatgtgcaa
attattcgcatgtctgccgaagagttcactcaagcgatcaatggcgagcgcgaattccgc
cgcttaaaagaccaaggggtaacgctgagtgactatcagtgcaataccatctttgtcgat
ccccctcgtgcgggcatggatgatgaaacctgcaaaatggtgcaaggttacgatcggatt
ttatatatctcctgtaaccctgagactttggtcgagaacctagaacgcctcagccaaaca
caccgcattagtcgctgtgcgctgttcgatcaattcccgttcacccaccataccgaagcg
ggtgtgtggttggagcgtaaataa
DBGET
integrated database retrieval system
