Salinivibrio sp. YCSC6: E8E00_02055
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Entry
E8E00_02055 CDS
T05946
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly00550
Peptidoglycan biosynthesis
saly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E8E00_02055 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
saly01002
]
E8E00_02055 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saly01011
]
E8E00_02055 (dacB)
Enzymes [BR:
saly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E8E00_02055 (dacB)
Peptidases and inhibitors [BR:
saly01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
E8E00_02055 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
saly01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
E8E00_02055 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Pox_I1
DUF2740
DUF2800
Motif
Other DBs
NCBI-ProteinID:
QCF37172
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All DBs
Position
I:complement(458527..459930)
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AA seq
467 aa
AA seq
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MVLVGVLLISALSPALSQSLRVEQLTPVLPQGSQLALWVSDVKTNHPQVALQADALLPPA
STQKLVTGLAARLYLPETFRFSTRLVQAGDDIALVFSGDPLLTRKDLRQLLRQLPARGLT
TINNVFLDGHIFSGKSRAVGWPWDILAVCYSAPSTSIALNHNCVQGAIYSTPDAEHTRVH
VPSHQPITVITEARAVSEEQKNAAHCDLDLTATPRNHYRFSGCLAHRERPLPLNFAVQNP
PAYVKAIIADELARLGVKVTGNIVQARTPNQIRELARHDSVNLEALLTRMIKDSDNLIAD
NLLKTVGQRYFQQPGSYRNGVAAVKAILAEKGLDLTHAIMVDGSGLSRNNRLSARQLSEV
VHYILTHPELGLKAMLPIAGIDGTLKYRQSVRRAPIKGRLFAKSGSLYGSHNLAGFIETD
DNQQQIVVQLVSHYHPDDEALPDNVPAPITQFERELYQALIHRRLLP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
attgtactggttggcgttttattgatcagcgccctttcgcccgccctttcgcaatcactg
cgcgttgaacagctcactccagtcctcccccaaggtagccaactggcattgtgggtgagt
gatgtcaaaaccaatcatcctcaagttgccttgcaagcggatgcattactgccaccagcc
agcacgcaaaagctggtaaccggtctcgccgctcgcttatatctgccagagacctttcgt
ttttctactcggttagtccaagctggtgatgatattgcgctggtgtttagcggtgatccg
ctgctcacacgcaaagacttgcgccaactacttcgccagctacccgcacgagggctcacc
acgattaataacgtctttttagatggtcatatctttagcggtaaatcacgcgctgttggc
tggccgtgggatattctcgctgtttgttatagcgctccctcgacgtccattgcgctcaat
cacaattgtgtacaaggcgcgatatacagcacaccagacgccgagcatacccgtgtccat
gttcctagccatcaaccgatcacagtcatcaccgaggcacgcgcggtcagtgaagagcaa
aaaaacgcggcacactgtgacttagaccttaccgcaactccccgcaatcattatcgtttt
tctggctgtttggcgcatcgagagcgaccgctgccgctcaattttgccgtgcaaaatccg
cccgcttatgtgaaagcgataattgccgatgaattagcccggctcggcgtcaaagtaaca
ggcaatattgtacaggcgcgcactccaaaccaaatccgagagctggcgcgtcacgactcc
gtcaacttggaagccttgctaactcgcatgataaaagactcggataacttaattgcggac
aatctgctgaaaacagtcggccagcggtattttcagcaaccagggtcgtaccgaaatggt
gtggcggcagtgaaagcaatcctcgccgagaaagggctggatcttacccatgccatcatg
gttgatggctcagggctatcgcggaataatcgtttaagtgcacgccagctttctgaggtg
gtgcactatattctcacccacccagaattaggcctcaaagcgatgctgcccatcgccggg
attgatggcaccttaaaataccgccagagtgtgcgtcgcgcgcccatcaaagggcggtta
tttgcgaaaagtggttcactttatggcagtcataatttggcagggtttattgaaactgac
gacaatcagcagcaaattgtggtacagctggttagccactaccaccctgatgacgaggcc
ttgccagataacgtaccagcccccatcactcagttcgagcgagagctttatcaggcgctg
atccatcgccgtctgctgccttaa
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