Salinivibrio sp. YCSC6: E8E00_02590
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Entry
E8E00_02590 CDS
T05946
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saly03400
]
E8E00_02590
DNA repair and recombination proteins [BR:
saly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E8E00_02590
Archaeal homologous recombinant proteins
E8E00_02590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
Branch
ABC_ATPase
ABC_tran
AAA_21
DUF4972
AAA_15
DUF87
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QCF35149
LinkDB
All DBs
Position
I:594033..597800
Genome browser
AA seq
1255 aa
AA seq
DB search
MKILALRGENLASIQHPFELDFSKGPLGDSGLFAITGKTGAGKSTLLDAICLALYDKIPR
FQANKKNDADIGLGDPATRVKANDVRSILSRGKGEGYAEVDFFAHDGSRWRAHWSVRRAR
GKADGRIQASEHWLENLTTGQRFAGKKQEVLSEIERLVGLSYEQFRRAVMLPQGDFAAFL
KASADDRAALLERMTGTEIYSRLSQMAHERARDEKQALDQLMQQLGDIQLLSEDEEQQLV
DEQAQCQQAVKHHQHQLKMLNDYRQQHTHLAQAQQALDDAQVALDEAEQEKAGVEARRET
LAQIERAQAAREDLNALQRYQWQSLSLGKDLAALARDEQAVAADYERQADRWREANRALT
DAEQAWADIEPKVREAQQIETQLASLDEQMREQNITLNEEQQKWRQAQQTLEQTRAHAQH
LVHRETIIAEQLAAFGDFGHVAEHYQPVFDNLKQFLDCQDALAALSDEHRQRQQQAQQWR
PQRDKLEQDIAQVDASSDQLKTKRAAAEPDRLIAEQEAEQSRYSQLQSTRRLQEAVLNEA
HNWQYWDERCQHNQLEFEKFDAIFRDSQTHLTRLKDTVTRQQAQVDEARHSLQQAMAVME
LEDLRQALNEGDPCPLCGATEHPYLHHAPVVESLIDQQQTRLAELQATLNQSQAEYYYWQ
KQHQQSEHACAELREQGQVWQAERDQYEKGLRVAIAELDSDIDSQTPLRDVLIDIEARAQ
QTQADYVACYQGMTERQQQLAHIQQIDAALSELQQAREQLVARRHHLDQALTECETRLSA
IDEQWHQQQAQRDSRCEALDKQLGKGQWQASLQQVGSARYIRQMEQKIQQYRALQAEREG
MAEEKQRTDTELATLTQQCQSLSDAIQSRQTQLVNLAQQHQQRMAARQALVGDQDLASLE
TEYKSRIDAQRQRRAEAEKAYTQASEQRAGLQARQQTLQQQRQDANQHYRTAVRRWIQWQ
PALGMSQYTLMAHLSLSEAWRADERQALNQIEARYQEAKTRFEEREQQLNHCHQAIATAK
AWFDEQALTDDKTVLETQQAEWQHAQEQAEQRVFDIRHRLTQAEQARQQAGSLTDKIDTQ
RSKTEQWLKLADLIGSASGAKFRNLAQSLTLAQLVEIANEHLASLSPRYALQTVPDSLLA
LQVVDHDMGDEVRSVESLSGGESFLVSLSLALALASLAADTRQLGSLFIDEGFGTLDPDS
LEMALSCLDTLQADGRQIGVISHVSTLVERIGAQVRVDSQGGGASRVLVTQQGVG
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggcattacgtggcgagaacctggccagtattcaacacccgtttgagttg
gacttttcgaagggccctttgggtgatagcggtttgtttgcgatcactggcaaaacgggg
gctggtaaatccacgttgttagatgctatctgtcttgcgctatacgacaaaatcccgcgc
tttcaagccaacaaaaagaatgatgcggatattggtctcggcgatcctgcaacccgagtt
aaagccaacgatgtgcgcagtattttgtcgcgaggaaaaggtgaaggttacgcagaagtt
gacttctttgcccatgacggcagtcgctggcgtgcccattggtcggtacgtcgcgcgcga
ggcaaagccgatggccggatccaagccagtgagcattggctcgaaaacctcaccaccggc
caacgttttgcaggaaagaaacaggaagtgctcagtgaaattgagcgtctggtcgggctc
agctacgagcagtttcgtcgtgcggtgatgctcccccaaggggattttgcggcttttttg
aaagcgtcagcagatgatcgcgcagcactgctggagcgaatgactggcaccgaaatttac
agccgtttatcccaaatggcccatgagcgtgcccgtgatgaaaaacaagcactggatcag
ctcatgcaacagctcggtgacattcagctccttagcgaagatgaagagcagcaattggta
gatgaacaagcccaatgccaacaggcggtcaaacatcatcaacaccaactcaaaatgctg
aacgactaccgccagcaacatacccacttagcgcaggcgcaacaagcacttgatgacgcg
caagtggcactggatgaggcggaacaagaaaaagcgggtgtggaagcgcgccgagagaca
ttggcacagattgaacgtgcccaagcggcgcgagaggatctcaatgcgctgcagcgttac
cagtggcagtccctatccttggggaaagatctagctgcactagcccgagatgaacaggct
gttgccgccgactatgagcgacaagcggatcgttggcgagaagccaatcgcgcattgacc
gatgccgagcaagcgtgggctgatatagagccgaaggtgcgtgaggctcagcaaatcgag
acccaattagccagtcttgatgagcaaatgcgtgagcaaaacatcaccctcaatgaagaa
cagcaaaaatggcgtcaagcgcaacagacccttgaacaaacccgtgcccatgcacagcat
ttggtgcatcgtgaaacgatcattgctgagcaactggcagcgtttggcgatttcggtcac
gtggctgagcactatcagccggtgtttgacaacctcaagcagtttcttgattgccaagat
gcgctagccgcactgagtgatgagcatagacagcgacagcagcaagcccagcaatggcgc
cctcagcgcgataagcttgagcaggatattgcgcaagtggatgccagcagtgaccagtta
aaaacaaaacgagcggctgcagaacccgatcgcctgatcgcggagcaagaagccgaacaa
tcgcgctatagccaattgcagtctacccgtcgtctacaagaggcggttttaaatgaagca
cataactggcaatactgggacgagcgctgccaacataatcagttggagttcgaaaaattt
gatgccattttccgcgatagccaaacccacctaacgcgtttgaaagacacggtaacgcgc
caacaagctcaggttgacgaagcgcgtcacagtttgcagcaagcgatggccgtgatggag
ttggaagacttgcgtcaggcgcttaacgagggagacccttgtccgctttgtggggcgact
gagcatccttacttacaccatgcgcctgtagtggaaagcttgattgatcagcagcaaacg
cgtcttgctgagctgcaagcgacactcaatcaaagccaagcagaatattactactggcaa
aagcaacaccagcaaagtgagcatgcatgtgctgagttgcgagagcagggacaagtatgg
caggcggagcgtgatcaatacgaaaaagggctgcgtgttgccatcgctgaattggatagt
gacatcgacagtcagacgccactgcgtgatgtgctcatcgatattgaagctcgtgcccaa
cagacgcaagcggactatgtggcctgttatcaaggcatgaccgaacgtcagcaacagctt
gcccatattcagcagattgatgcggcactcagtgagttgcaacaagctcgagagcagctt
gttgcccgtcgtcatcacttagaccaagcgctaaccgaatgtgaaacacgccttagcgcc
attgacgaacaatggcaccagcaacaagctcagcgtgatagtcgctgcgaagcactcgat
aaacagctaggcaaaggccaatggcaggccagcttacaacaagttggctccgcacgttac
attcggcaaatggagcaaaaaatccagcaataccgcgctttgcaagcggagcgtgagggg
atggcggaagaaaagcagcgtaccgacaccgagcttgccacgctcacacagcagtgtcag
agcttgtcagatgccattcagtcacgtcagacgcagttggtgaacttggcccaacaacat
cagcagcgtatggcggcgcgacaagcgctggtgggggatcaggatcttgcgagcttagaa
actgagtacaaatcacgcatagacgcgcagcgccagcgtcgagctgaggcggaaaaggcg
tatacgcaagccagtgaacaacgcgccggcttgcaagcccgtcagcaaactttgcagcag
caacggcaagatgctaatcagcactatcgtaccgccgttaggcgttggatccagtggcaa
cctgcgctgggaatgagtcagtatactttgatggcgcatttatcattgagcgaggcttgg
cgggcggatgaacgccaagctttaaaccagattgaggcgcgctatcaggaagcaaaaaca
cgctttgaagaacgtgaacagcagctaaatcattgtcatcaggccattgcgaccgccaaa
gcgtggtttgatgaacaagcgctgacagatgacaagacagtcttggagacgcagcaagcc
gagtggcaacacgcgcaagagcaggctgagcagcgtgtgttcgatattcgtcatcggctg
acgcaagccgagcaggcacgtcagcaagcggggagtttaacggacaaaattgatacccag
cgcagcaaaacggaacaatggctaaaactggccgacttaattggctcggccagcggtgcc
aaatttcgtaaccttgcccaatcactcacactcgcccagctggtggagattgccaacgag
caccttgcttcgctctcccctcgctacgcgctgcaaaccgtacccgacagtttgttagca
ttgcaggtggtggatcatgatatgggagatgaagtgcgcagcgtggaatccctctctgga
ggagagagtttcttggtttctttgtcgctggcactggcgctcgcctcattagcggcagat
acccgtcagttaggatcgctgtttatcgatgaaggctttggcaccttggaccctgacagc
ttagagatggcgctgtcgtgtctcgataccctgcaggcggatggacgccaaattggtgtg
atctctcatgtgagtacgttggtcgagcggattggcgcccaagttcgcgtagacagtcag
ggcggaggtgcaagtcgcgtgctggtcacacagcaaggtgttggctag
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