Salinivibrio sp. YCSC6: E8E00_06205
Help
Entry
E8E00_06205 CDS
T05946
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
saly01002
]
E8E00_06205
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saly01011
]
E8E00_06205
Peptidases and inhibitors [BR:
saly01002
]
Cysteine peptidases
Family C82
E8E00_06205
Peptidoglycan biosynthesis and degradation proteins [BR:
saly01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
E8E00_06205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QCF35789
LinkDB
All DBs
Position
I:1350830..1352569
Genome browser
AA seq
579 aa
AA seq
DB search
MKIRPDAYLANLLIVFSLILSPVHAASPNSSSSVRFLTESAGQSLSADEHHKRAYQHARD
WLQAAAPDATVLAYPDLLTRDYLEHGFVLLWERDDARYELETQVNVISLAGISPEFEWRA
WQLRQLREQGQDLAYDVFATDTLYALLSYQAAIPQKGKQWFFGAQHRAPLPAPALPMREQ
VFQAGLDHTLYAFLYHRRPANQQYRALVTEIIRLQQDANQLWPTVALNGLVRPNEAVATT
FALNLVENLRRQGFWGEDQRLQAIDGHSVRYGGDLLEAVREFQGQHGLTVDGIIGPSTAR
WLNRDAQDRIRLLALNAERLRLWPDNQPNRIVVNIPDYRMTLWFDDQSVFESKVVVGRTS
RRTPLFSSRLDSVVLNPSWNVPQSIVRRDILPKLARDESYLSQNHYRILPDWHSDQIIDP
TTIDWQQVRVDGFPYRLQQAPGKLNALGRFKFNTPNRNAIYLHDTPARSLFSKSRRAFSS
GCIRVEYAEELANVLLDLSGQRLTDYQTYLDATQTKWISLRRPLAVQTIYQTAWVTEDGR
VAFRDDVYAYDTKPNRDVTTREPSYLTQQRPLQQNEHTQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaggccggacgcctatttggctaaccttctgattgtatttagcttaattttg
tcgcctgtccatgcggcatcgcctaacagcagtagcagtgtgcggtttttgaccgaatca
gccggacagtctttgtcagccgatgagcatcataaacgcgcctatcagcatgcccgagat
tggctgcaagcggccgcgccggatgccactgtgctcgcctatcctgatctactcacccgc
gactatctggaacacggattcgttttgctgtgggagcgagacgatgcgcgctatgaactt
gaaacacaggtgaacgtgatttcgctcgctgggatcagccccgagtttgaatggcgagca
tggcaattacgccagcttcgcgagcaaggccaagatttggcatacgatgtgtttgcgacc
gataccctctatgcactgctcagctatcaggccgctattccccagaaaggaaaacaatgg
ttttttggcgctcaacatcgcgcgccacttccggcgcctgctttgcccatgcgggaacag
gtatttcaggctgggttagaccatacgctttacgcctttttataccatcgtcgcccagct
aatcagcaatatcgcgcgttagtgaccgaaattatccggctacaacaagatgcgaaccaa
ctttggccaacggtggcattaaacggattagtcagacccaatgaggcggtggcgacaacc
tttgcgttgaatttggtagaaaatctgcggcgacaagggttttggggggaagatcaacgg
ctacaagcgattgatgggcacagcgttcgttatggcggtgacttgttggaggccgtgcgc
gaattccaagggcaacatggactgacggtggatggtatcattggtccatcgacggcacga
tggctaaatcgtgatgcgcaagaccgcattcgattgctcgcgctcaatgctgagcggctt
cgcctatggccggataatcagccgaatcgtattgtggtcaatattcccgattaccggatg
accttatggtttgacgatcaaagtgtgtttgaaagtaaggtcgtggttggacgcacatcg
cgccgtacaccattgttttcgtctcggcttgattcggtggtgcttaaccccagctggaat
gtgccgcaaagtattgtgcgacgggatattttgccaaagttagcgcgcgatgagtcttat
ctgagccaaaaccattatcgaattctgcctgattggcacagcgatcaaatcatcgatcca
accactattgactggcagcaagtgcgggttgatggttttccttatcgcttgcagcaagcg
ccgggcaagctaaatgccttgggacgatttaaatttaacacccctaatcgcaatgcgatt
tatctacatgatacgccggcacgtagcttgtttagcaaatcacgccgcgcgtttagctcc
ggctgcattcgggtggaatatgccgaggagctggccaatgtgctgctcgatttgtcagga
caacgtttgaccgactatcaaacctatctggatgcgacgcaaaccaagtggatcagtttg
cgtcgcccactcgccgtacaaaccatatatcaaacggcgtgggtgacggaagacgggcgc
gttgcatttcgagatgatgtttacgcctatgacaccaaacctaatcgagatgtcacgacg
cgggagccgagttatttgactcagcagcgaccgctacaacaaaacgaacatactcagtag
DBGET
integrated database retrieval system
