Salinivibrio sp. YCSC6: E8E00_08885
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Entry
E8E00_08885 CDS
T05946
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly03030
DNA replication
saly03430
Mismatch repair
saly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E8E00_08885
03430 Mismatch repair
E8E00_08885
03440 Homologous recombination
E8E00_08885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saly03032
]
E8E00_08885
03400 DNA repair and recombination proteins [BR:
saly03400
]
E8E00_08885
Enzymes [BR:
saly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E8E00_08885
DNA replication proteins [BR:
saly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E8E00_08885
DNA repair and recombination proteins [BR:
saly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E8E00_08885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
AAA_22
AAA_14
AAA_2
TsaE
AAA_18
AAA_19
AAA_16
nSTAND3
Rad17
TniB
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QCF36276
LinkDB
All DBs
Position
I:complement(1937513..1939618)
Genome browser
AA seq
701 aa
AA seq
DB search
MSYQVLARKWRPHSFDTVAGQQHVLTALANALDHDRLHHAYLFSGTRGVGKTTIARIFAK
GLNCEQGVSSSPCGQCQTCREIDEGRYVDLLEIDAASRTKVEDTRELLDNVQYKPARGRY
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKHFGA
SQIQTQLETILAQEGVDAESRALMLLSRAAEGSMRDALSLTDQAIALGNGQITTASVSDM
LGTLSTDHALLLLEALVNHDAVELMSALEQIAHIGVEWDGLLKELAGQLHQIALLQALPN
THSEASPDKARLHALATRLSPQDVQLCYQMALQGRQDLPYAPDGRAGLEMVLLRMLAFQP
VKTVPYEPKAISVPAQAPQTQQAATQKPHTDPSQAIGALKAQVQQATSAPREQTAPAPQS
APHQSQPEPQAQQPASTQPDRAEEAQTTPQSAASSLIQARNQLRSRMKRQSSQTDNTPKK
TERTSAKQDALSVLDRITANTQPASPVSDSSFEQAPAALSHQKTAETAPVSDEPYQWTPT
QPQPEKETATHLTPNALKKALEHEKTPAMRDKLVQEANAEDHWCALADSLAVPRLVKQMA
LNASMVREGNTVVLTLRPDQAHLNKEKAQQQLAQALSQALNAPITLEVHLGDSGRTPLEW
REHLYQQKLAQATQSLHNDPNVGFILQRFAAELDEDSIRPI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagtactcgcacgtaaatggcggccacatagctttgataccgtggcaggg
cagcaacatgtgctgactgcgcttgccaacgcacttgaccacgaccgtttgcatcatgct
tacttatttagcggtacccgtggggtaggtaaaaccaccatcgcgcgtatttttgccaag
gggctgaattgcgagcaaggcgtctcttcttcaccttgtggtcagtgtcaaacgtgccga
gagattgatgaagggcgttatgtcgatttattagagatcgatgcggcatcgcgcaccaag
gttgaagatacccgtgagttactggataacgttcagtacaagcccgcgcgtggtcgctat
aaggtgtatttgattgacgaagtccatatgttgtctcgtcatagtttcaatgcactgctc
aaaacgctggaagagccgcctgagtatgtgaaattcctattggccactacggatccgcaa
aagctgccggtgactatcctgtcacgctgtttgcaatttcacttaaaacatttcggtgcc
agccaaattcaaacccagttagaaaccatcttggcgcaagagggcgtagacgctgagtcg
cgtgcgttgatgctactttctcgcgcggctgaaggcagcatgcgtgatgctctgagctta
accgaccaagcgattgcgctaggcaacggccaaattactacggcatcggttagcgacatg
ctgggtacactgagcaccgatcacgcattgctgctacttgaggcgctggttaaccatgat
gcggtggagctgatgagtgccttagagcagattgcgcacattggcgttgaatgggacggt
ttactcaaagagctggctgggcaactgcatcaaatcgccttactgcaagcgttacctaat
acgcatagcgaggcgtcaccggacaaagcacgcttgcatgcactggcgacccgactatcg
ccccaagatgtgcaattgtgctaccaaatggcgctgcagggtcgtcaagatttaccgtat
gctcccgatggacgtgcggggctggaaatggtgttgttgcggatgttggcattccagccg
gtcaaaactgtcccctatgaacccaaagcgatttctgtgccggcccaagcccctcaaacg
caacaggctgcgactcagaaaccgcacaccgatccgtctcaggcgattggggcgttaaaa
gcgcaggtgcagcaagcaacatcggctccaagggagcagactgcgccagctccccaatcg
gcgccacatcaatcacaacctgagccacaggcgcaacagccagcgtcgacgcagccggat
agggcggaggaagcacagactacccctcaatctgcggcatctagtttgattcaggcgcgg
aatcaacttcgtagtcgtatgaaacgtcaatcgagtcagacggataacacgccaaaaaag
actgaacggacatcggccaagcaagatgcgttgtcagtgctggatcgtattactgcgaat
acccagcctgcgtcgccggtgtccgactcgtcttttgagcaagcgccggcggcattgtct
catcaaaaaacggctgaaacggcgccggtgtctgacgagccttatcaatggacgccgact
caaccgcagcccgagaaagaaacagccacgcatttaacgccaaatgcgctgaaaaaggcg
ctagagcatgaaaaaacaccagcgatgcgggataagcttgtccaagaagctaacgcggag
gatcactggtgtgcgttggcagacagtttggcggtgccgcgcttggtgaagcaaatggca
ctgaatgcgtcgatggtgcgtgagggcaatacggtagtgttgaccttacgtcctgatcag
gctcacctcaataaagaaaaagcacaacaacagctcgcacaggccttgtctcaggcccta
aatgcccccataacattagaagtccatttaggcgatagcgggcgaacgccattagagtgg
cgagaacatctctatcaacaaaaattagcgcaggcgacacagagcttgcataatgatccg
aatgtcggttttattcttcagcgttttgctgcggaactggatgaagacagcattcgacca
atttag
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