Salinivibrio sp. YCSC6: E8E00_09115
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Entry
E8E00_09115 CDS
T05946
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saly03009
]
E8E00_09115 (dbpA)
Enzymes [BR:
saly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
E8E00_09115 (dbpA)
Ribosome biogenesis [BR:
saly03009
]
Prokaryotic type
rRNA helicases
E8E00_09115 (dbpA)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QCF36318
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All DBs
Position
I:complement(1988020..1989402)
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AA seq
460 aa
AA seq
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MTDTAFSSLALPADLLDNLATLGYTHMTPIQAQSLPSVLSGKDIIAQAKTGSGKTAAFSL
GVLAKLNVKRFRVQSLVLCPTRELAEQVAVEMRKLARGRHNVKVLTLCGGVSIGPQIGSL
EHGAHIIVGTPGRVDDHLRKGTLRLDDVETLVLDEADQMLDMGFQDTLDAIIARVPAHRQ
TLLFSATFPRSINAIAQRVLSHPVSVKVDEVQTQSTISQHVYKVDDNKQRYQALKLLLLH
FQPQSCVVFCTTKAQTQQVCDNLEDDGFSAVALHGDIEQRGRERTLVKFANKSASVLVAT
DVAARGLDIDDMDMVINYQLAHDPQTHVHRVGRTGRAGKKGVACSLYNDAEHYKLAMIGD
QYDRDFLPEALPSQDLLGTVPYQLEMATLMIDSGKKQKVRAGDILGALTGQAGIDGKQVG
KINVLDNVAFIAVSQSCVKAALRKLNDGKVKGRTIRARRI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgactgataccgctttttcctcgcttgcgttacccgctgatttactcgataacttagca
accttgggttatacgcacatgacgcccattcaggcgcagagcttaccgtctgtgctcagt
gggaaagatattattgcccaagcaaaaaccggctcggggaaaacggcggcgtttagcctg
ggcgtgttagccaaactgaacgtaaaacgctttcgcgtgcaatctttggtgctgtgtcca
acccgtgagctggccgagcaagtggcggttgagatgcgtaagttggcgcgtggtcgtcat
aatgtcaaagtactgacgctttgcggtggagtatcgattggcccacaaattggctcattg
gagcatggtgcacacattattgtcggcactccggggcgtgtggatgaccatttacgtaag
ggcaccttgcgtctcgatgacgttgagacgttggtgttggatgaagccgaccagatgctg
gatatgggcttccaagataccttggatgctatcattgcgcgtgttcctgctcatcgccaa
accttgttattcagcgctaccttcccgcgctcgatcaatgcgattgcccagcgagtgttg
agccaccctgtctccgttaaagtggatgaggtgcaaacgcaaagtacaatctcgcaacac
gtttataaagttgatgacaacaagcagcgttatcaagcgttaaagctactgttattacac
tttcagccgcaaagttgtgtggtgttttgtacaaccaaagctcaaacccaacaagtttgc
gataacctagaagatgatggttttagcgccgttgccttgcatggcgatattgaacagcgt
ggccgtgagcgcaccttggtaaaatttgccaacaaaagtgcgtctgtgctggtggccact
gatgtggctgcgcgcggcttagacattgatgacatggatatggtgatcaactatcaactc
gcccacgatccgcaaactcatgtacaccgcgtcggccgtaccggtcgcgctggcaaaaaa
ggggtggcgtgttcgctatataacgatgccgagcactataagctggcgatgattggcgat
cagtatgaccgcgattttctccctgaagccctgccgtcgcaagatttgctcggcaccgtg
ccctatcagcttgagatggcaaccttgatgattgactcaggtaaaaaacaaaaagtacgc
gcgggtgatattttgggcgcgctgacgggccaagcgggcattgacggtaagcaggtgggt
aaaatcaatgtactcgacaatgtggcgtttattgctgtgtcccaatcctgcgttaaagcc
gcgttgcgtaagctcaatgatggaaaagttaaaggacgcactatccgcgcccgccggatt
tag
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