Salinivibrio sp. YCSC6: E8E00_09205
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Entry
E8E00_09205 CDS
T05946
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E8E00_09205 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saly03400
]
E8E00_09205 (xthA)
Enzymes [BR:
saly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
E8E00_09205 (xthA)
DNA repair and recombination proteins [BR:
saly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E8E00_09205 (xthA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
DUF3014
Motif
Other DBs
NCBI-ProteinID:
QCF36329
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All DBs
Position
I:2004083..2004886
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AA seq
267 aa
AA seq
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MKIISFNINGIRARLHQLQALIEKHQPDVIGLQETKVHDDAFPLADVEAMGYEVHFHGQK
AHYGVAMLCKKSPISVQKGFPTDDEDAQRRMIMATFEDENGKPITVLNGYFPQGENRSHE
TKFPAKRKFYQDLMTYLSGRDPSEQLVVMGDINISPKDDDIGIGEQNAKRWLRTGKCSFL
PEEREWLGTLMDWGFVDTFRALHPTVNDQFSWFDYRSRGFDDNRGLRIDVILATPDLANQ
CIDAGIDYELRAIEKPSDHAPIWATFK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcatttcattcaatatcaatggtattcgtgctcgtttgcatcaattgcaagcc
ttaattgaaaagcatcaacctgacgtgatcggattacaagaaaccaaagttcatgacgac
gccttcccgctcgcggatgtcgaagcgatgggttatgaagtgcactttcatggccaaaaa
gcccattatggcgtggcaatgctatgcaaaaagtcccctatcagcgtgcaaaaaggcttt
cccactgatgacgaagacgcccaacgccggatgatcatggcgacctttgaagacgaaaac
ggcaagccaattactgtgctcaacggttacttcccgcaaggggaaaaccgcagccatgaa
accaaattccccgccaagcgtaagttttatcaagacctaatgacttatttgtctggccgt
gatcccagtgagcagctggtggtgatgggcgatatcaatatcagcccgaaagacgatgac
atcggcattggtgagcaaaacgccaaacgctggctacgcaccggtaagtgctctttctta
cccgaagagcgtgagtggctgggcactcttatggattgggggtttgttgacactttccgt
gccctgcacccaaccgtgaacgatcagttctcgtggtttgactatcgctcccgcggcttt
gacgataaccgcggcctgcgtattgacgtgattctggccactccagatctagcgaatcaa
tgcatcgatgcaggcattgactacgagctccgtgcgattgaaaaaccgtcagatcacgcg
ccgatttgggcaacctttaagtaa
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