Salinivibrio sp. YCSC6: E8E00_10050
Help
Entry
E8E00_10050 CDS
T05946
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saly01011
]
E8E00_10050
Enzymes [BR:
saly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
E8E00_10050
Peptidoglycan biosynthesis and degradation proteins [BR:
saly01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
E8E00_10050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM1_NFP_LYK
LysM3_NFP
LysM2_CERK1_LYK3_4_5
ExoX-like_C
Corona_I
Motif
Other DBs
NCBI-ProteinID:
QCF36478
LinkDB
All DBs
Position
I:2180111..2181685
Genome browser
AA seq
524 aa
AA seq
DB search
MKYRFVILSTLLLSGCQLTGDAQNTDIATKKTPVAATPVKATPTVSATKKQPTPATPTVL
SPQMQEDVWQRISMQLSLPVPNNSAIRQYRNWYLKYPNHIATVAERATPFLHLIVEKVEA
RNMPLEIALLPIVESSFDQFAYSHGRAAGLWQFVPATGERFGLEQNWWYDGRRDVAKATD
AALDYLEYLNGMFDGNWLHAIAAYNSGEGRVARAIRNNEKRGKPTDFWHLDLPKETSSYV
PKLIALGDVIRHKDKYGLEVPAIANKPALALVEPNIQMDLALAANYAGLSVSELQSLNPA
YNHWATAPAGPTHLLLPIDKVDRFNTELAKNNNQGLRVERYYVQSGDSLSEIAAHYNTTV
KVLQRANQLSTTRIRVGQPLMIPVSLKDESQYTLSAPQRLAALQAAERDGYKRTHTVRKG
DSFWTIARRYDVDYRQLAKWNGMSPRDTLSIGQKLVVWDKNDNAKRVCTITYQIRQGDSL
SSIAQRYNVSVSDLVKWNQLRKNAYIQPGQRLTLHIDISRSSGS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccgttttgttatcttgagcaccctgttgctgagcggctgtcagctgacaggt
gatgctcagaatacggatatcgcaacaaaaaagaccccagtcgcggctactccggttaaa
gcaacaccgaccgtttccgcgaccaagaaacaaccgaccccagcgacaccaacggtactt
tcaccgcaaatgcaggaggatgtgtggcaacgaatcagcatgcagctgtcactgcccgtc
cctaataacagcgctatccgccagtaccgcaattggtacctgaaatatccaaaccatatt
gccaccgtcgcggaacgtgccactcctttcttgcacttaattgttgagaaagtagaagcg
cgcaatatgccgcttgagatcgcattgctacctatcgtcgaaagctcgtttgatcaattt
gcatactctcacggtcgtgccgctggcttatggcagtttgtaccagcaaccggtgaacgc
ttcgggctggaacaaaattggtggtatgacggtcgtcgtgatgtggcaaaagccaccgat
gccgccttggactacttggaataccttaacggtatgtttgatggcaattggcttcacgct
attgccgcctacaattccggtgaaggccgcgttgctcgtgcgattcgtaacaatgagaaa
cggggcaagccaaccgacttttggcacctcgatttacccaaagaaaccagtagctacgtc
cccaagctgattgcactgggcgacgtcattcgtcataaagataaatatggccttgaggtt
cccgccatcgcgaacaaacctgcactggcattggttgaacccaatatccaaatggaccta
gcactggcagccaactatgctggcctgagcgtgtcagagttacaaagccttaatccggct
tacaaccactgggcaaccgcacctgccggcccgacccacttgttacttcccatcgataaa
gtcgatcgtttcaacaccgaactggcgaaaaataacaaccaagggctacgtgtggagcgt
tattacgtccaatcgggcgatagcctgagtgaaattgccgcccactacaacacgacggtc
aaggtactacagcgcgctaaccaactgagtaccacacgtatccgtgtcggtcagcctctg
atgatcccagtctcattgaaagacgaatctcagtacaccttaagcgcccctcagcgcctt
gcagcattacaagccgctgagcgcgacggttacaagcgtacccatacagtgcgtaaaggg
gatagtttctggacaattgctcgccgctatgacgttgactaccgacaactggcaaaatgg
aatggcatgagtcctcgagataccttgagtattgggcaaaagctggtcgtttgggataaa
aacgataacgcaaaacgtgtttgtaccatcacttatcagattcgccaaggcgactcccta
agcagcattgcgcagcgttacaatgtgtccgtgtctgatctggttaagtggaatcagcta
cgcaagaacgcctatattcagccgggccagcgcctcaccctgcatattgatatctcgcgg
agtagcggctcatga
DBGET
integrated database retrieval system
