Salinivibrio sp. YCSC6: E8E00_10175
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Entry
E8E00_10175 CDS
T05946
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly03030
DNA replication
saly03430
Mismatch repair
saly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E8E00_10175 (dnaE)
03430 Mismatch repair
E8E00_10175 (dnaE)
03440 Homologous recombination
E8E00_10175 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saly03032
]
E8E00_10175 (dnaE)
03400 DNA repair and recombination proteins [BR:
saly03400
]
E8E00_10175 (dnaE)
Enzymes [BR:
saly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E8E00_10175 (dnaE)
DNA replication proteins [BR:
saly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E8E00_10175 (dnaE)
DNA repair and recombination proteins [BR:
saly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E8E00_10175 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCF36492
LinkDB
All DBs
Position
I:complement(2200807..2204286)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSEPRFVHLRIHSDFSMVDGLSKVPPLVKKVAEMGMPAMALTDFSNLCGLVKFYNTANNV
GVKPIIGADFKVQSEAFGDELCQLTLLAADKAGYKNLTLLISKAYLRGHVQHTPVIDQEW
LVEHADGLIVLSGGCRGDLGKALLKGNKALAEECARFYQAHFPNAYYMELVRTGRQDEEV
YLHFAVDFATEHDLPVVATNEVCFISPDEFDAHEIRVAIHDGYTLDDPRRPKNYSAEQYL
RTEQEMCELFADIPEALANSVEIAKRCNVPVRLNEYFLPNFPTEGMEIDQYLVKRAKEGL
EERLAFLFPDEKERALKRPEYDERLDRELGVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDKRDLVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LVEVYNADEEVKALIDMARMLEGVTRNAGKHAGGVVISPTTITDFAPLYCDSEGHHPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGMINPRLQAQGKDPIDIAAIPMADQASFEML
RKAETTAVFQLESRGMKELIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREQ
VSYPDEKWQHESLKETLEPTYGIILYQEQVMQIAQILAGYTLGGADLLRRAMGKKKPEEM
AKQRDIFEKGAIANGIDGELAMRIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVEECRRMKLTVLPPDVNAGLHRFTVNDKGEIVYGIGAIKG
VGEGPIDNIVAAREQDGYFRDLFDFCARIDTKKVNKRVIERLIRAGAMDRLGPHRAAMMA
SLDDAIRAASQHHQAESYGQTDMFGVLTDAPEEVEHAYANVAPWPDKVWLEGERETLGLY
LTGHPINSYRKELKHYVTWRLEDAHATKRDVVSTVAGLVIAARVMTTKRGSRLGILTLDD
RSGRMEVMLFSDVLDKYLDLVEKDRILVVSGQVSFDDFNGGLKMTAREIMDISQAREKYA
RCLGISIMEEQIDAPFFERFHDTLAPYRSGTVPVNLYYQRRDARARLRLGAEWRITPADE
LIDNLKGLLGDEQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccacgtttcgtccatttacgtattcacagtgatttctccatggtcgatggg
ttgtccaaagtcccgccactggttaagaaagtggccgaaatgggcatgcctgcgatggcc
ttgacagactttagcaacctttgtgggttggtaaagttctataacaccgcgaataatgtg
ggtgtgaaacctatcattggtgccgattttaaggtgcaatcggaggcgtttggcgatgaa
ttatgtcagctgacccttcttgccgcggataaagcgggatataaaaacctcactttactg
atctccaaagcttacttgcgcggccatgttcaacatacgccagtgatcgaccaagagtgg
ctggtagaacacgctgacgggttgattgtattatctggcggttgccgaggagacttgggc
aaagccttactgaaaggcaataaggcgcttgctgaagagtgcgcccgtttttatcaagcc
catttccccaatgcttattacatggagctcgttcgcaccggacgtcaggatgaagaagtg
tacctacactttgcggtcgactttgccaccgagcacgacctgccagtggtggcgacgaac
gaagtgtgctttatctcgcccgacgagtttgacgcccacgagatccgtgtggccatccac
gatggttatacgttagacgacccacgtcgcccgaaaaactacagtgccgagcaatatctg
cgcaccgagcaagagatgtgcgagctctttgcggatatcccagaagcattggcaaatagc
gtggaaattgccaagcgctgtaatgtgccggtcagacttaatgaatacttcctgccgaac
ttcccaaccgaagggatggagattgatcagtacttggtcaaacgcgccaaagaaggccta
gaagagcgactggcgtttcttttccccgatgagaaagagcgcgcccttaagcgacctgaa
tacgacgaacgccttgaccgtgaactcggtgtgattaaccaaatgggcttccctggttac
tttttgatcgtgatggagtttatccaatggtcaaaagataacgatattccggtgggaccc
ggacggggttccggggccggctccttggttgcgtacgcccttaaaatcactgatttggat
cccctagagtttgatctgctttttgagcgcttcttgaacccagagcgggtttccatgccc
gacttcgatgtcgacttttgcatggataagcgtgatttggtgatcgaccacgtggccgaa
atgtacggccgggatgcggtatcccagatcattactttcggtaccatggcggccaaagcg
gtgatccgagacgtgggtcgtgtattgggtcacccctatgggtttgttgaccgtatttct
aaattggtgccgcccgacccgggcatgacgctggcaaaggcgtttgaagctgaaccgcag
ttggttgaggtttataacgcagacgaagaagtcaaagcgttgatcgacatggcccgcatg
ctcgaaggggtgacacgtaacgcgggtaagcacgcgggcggggtggtgatttcacctacg
acgattacggactttgcaccgctatattgtgacagtgaagggcaccaccctgtcacccag
tttgataaaaacgatgttgagacggccggtcttgtgaagtttgacttcttggggctgcgg
acgctgaccattatcgactgggcgctgggaatgattaaccctcgcttacaagcgcaaggc
aaagatcctatcgatatcgcggcgattccgatggccgaccaagcatcattcgagatgctg
cgtaaggcagagacgacagctgtgttccagctggaatcgcggggcatgaaagagctgatc
aagcgtctccaaccggactgttttgaagacatgatcgcactggtggctctgttccgccca
ggcccattgcaatcagggatggtggataactttatcgaccgtaaacacggacgagaacaa
gtctcttatcccgatgaaaagtggcaacatgagtcactgaaagagacccttgagccgacc
tacggcatcatcttgtatcaagagcaggtgatgcaaattgcccagatcttagccgggtat
acgctcggcggcgccgatttgctacgtcgtgcgatgggtaagaaaaaacccgaagaaatg
gccaagcagcgcgacatctttgaaaaaggcgcgatcgcaaacggcattgatggcgaactt
gccatgcgtatctttgacttggtggaaaagtttgccggttatggtttcaacaaatcacac
tccgccgcttatgccttggtctcttatcaaacactgtggttaaaggcgcattatccggct
gaattcatggccgccgttatgaccgcggatatggataacaccgataaagttgtcggactg
gtggaagagtgccgtcgcatgaaactaacggtactccccccagatgtgaacgcgggtttg
caccgctttaccgtcaatgacaaaggggagattgtctacggtattggcgcgattaaaggg
gtgggtgaagggccgatcgacaatatagttgcggcgcgagagcaagatggctacttccgt
gacttatttgatttctgtgcgcgcattgataccaaaaaagtcaataagcgtgtgattgaa
cgcttgattcgcgcaggcgccatggataggcttggccctcatcgagcggcaatgatggca
tcactcgatgacgctattcgcgcggccagtcagcatcatcaagccgagtcttacggacaa
accgatatgtttggtgtcctcacggatgcaccggaagaggtcgagcacgcctatgcgaat
gtggcaccttggccagataaagtgtggctggaaggggagcgagaaaccctagggttgtat
ttgaccggccatcccatcaatagctatcgtaaagagcttaaacactatgtgacatggcga
ttggaagacgcgcatgccactaagcgtgatgtggtgtctacggtcgccggtcttgtgatt
gcggcgcgtgtcatgaccaccaagcgcggttctcgtcttgggatcttaacccttgatgat
cgctcgggccgcatggaagtgatgcttttttctgacgtactcgacaaatatctcgatctg
gtggagaaagacagaattctggtggtctcaggacaggtcagctttgatgacttcaatggt
gggcttaaaatgacggcccgtgaaatcatggacatcagtcaagcgcgagaaaaatatgcg
cgctgtttgggcatctctatcatggaagagcaaattgatgccccgttttttgaacggttt
catgatacgttggcaccgtaccgttcagggactgtgccagtgaatctttattaccagcgc
cgtgatgcacgggcgcggttacgtttaggggcggagtggcgaattacccccgcggatgaa
ctgatcgataatttaaaaggcttgcttggcgacgagcaggtcgaattagagtttaactaa
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