Salinivibrio sp. YCSC6: E8E00_12725
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Entry
E8E00_12725 CDS
T05946
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E8E00_12725 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saly03400
]
E8E00_12725 (mutM)
Enzymes [BR:
saly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
E8E00_12725 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E8E00_12725 (mutM)
DNA repair and recombination proteins [BR:
saly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E8E00_12725 (mutM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QCF36952
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Position
I:complement(2729030..2729842)
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AA seq
270 aa
AA seq
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MPELPEVEVSRMGITPYVEGQTVTQIIVRQPQLRWLVPDELQLLQGQVIRRITRRAKYLL
LECDLGTALVHLGMSGSLRVLPASLAPEKHDHVDVILSNNMMIRYHDPRRFGAWLWQAQD
TMHQVLSKLGPEPLSDAFNADYLLARAKGKKLVMKSFIMDNAVVVGVGNIYANESLFCAG
IHPKRPAGSLTHSEAACLVDEIKTVLAAAIAQGGTTLKDFTNVDGKAGYFAQELRVYGKA
GEPCPQCETVLERVVIGQRATVFCPHCQPL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaagtcagtcgcatggggatcactccctatgttgaaggt
cagaccgtcacccaaattattgttcgccaaccacagctgcgctggctggtgcctgatgaa
ttgcaattgctccaaggccaagtgattcgccggataacacgtcgtgccaaatatttgttg
cttgagtgcgatttggggacggcgcttgtgcatcttggaatgtcgggcagtttacgggta
ttacccgccagcttagccccagaaaagcatgaccatgtggatgtcatcctcagcaacaat
atgatgatccgttatcacgacccaagacgatttggcgcttggctgtggcaagcgcaggat
acaatgcatcaagtgctgagcaagcttggccccgagccattaagtgacgcttttaacgct
gattatttactggcgcgtgccaagggtaaaaaactggtgatgaaatccttcattatggat
aacgcggtggtcgttggcgtggggaacatctatgccaatgaatctcttttttgtgcgggg
atccaccccaaacgcccagcagggagcctgacgcactcagaagcagcatgtcttgtcgat
gagataaaaaccgtgctcgcggcggcgattgctcaagggggcacgaccttaaaagacttt
accaacgtggatggcaaagcaggctattttgctcaggagcttcgggtttacggcaaagcc
ggcgaaccttgtccgcaatgcgagacggtattagagcgtgtggtgattgggcagcgggca
acggtattctgcccgcattgccagccactatga
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