Salinivibrio sp. YCSC6: E8E00_16745
Help
Entry
E8E00_16745 CDS
T05946
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saly03016
]
E8E00_16745
Enzymes [BR:
saly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
E8E00_16745
Transfer RNA biogenesis [BR:
saly03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E8E00_16745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF7716
Motif
Other DBs
NCBI-ProteinID:
QCF37831
LinkDB
All DBs
Position
II:complement(649684..651666)
Genome browser
AA seq
660 aa
AA seq
DB search
MFQDNPLLAQLKQQIQETLPKKEGTVKATEKGFGFLEVDDKTSLFIPPPYMKKVMHGDRV
EAFVRTEKEREVAEPDALIEQSIDRFIGRVQWIRNRLNIVPDHPQIKDAIRAKTQRGLSQ
DELKDGDWVVASLIRHPLKGDDNFFCQVSEKITDANDKIAPWWVTLAKHNLPNQEPAPKE
AWAMLEQGLERRDLTALPFVTIDSESTKDMDDALYVKANEQGGFTMTVAIADPTAYIDAD
DDLDQVARSRGFTIYLPGRNIPMLPRDLSDDLCSLRAHEKRPALCCTFNIAADGTIADDA
EFFSAWIQSHGQLAYDKVSDYIEQGEQAAWQPESSDIADQIHQLHQFALARIEWRETHAV
TFPDRPDYRFELSEDNDVIAIHTDARRIANRIVEEAMISANICAGRKLRESFGFGIFNTH
AGFNSDKLDDVVELVKAHEGEADSESLATVEGFSALRRWLNSLDSTYLDNRLRRFQAYSE
IGHEPAPHYAMGLDVYATWTSPIRKYGDMINHRLLKASIRGESEANAPADTVGEELAGHR
KHHRMAERDVADWLYVRLLKPEVEAQTRYTAEIFDINRAGMRVRLLENGAPAFIPSSLII
DNKTRIACDKETGTVTIDGNVEFKLGDSLEVVIADIKESTRSIVAKPTQVFALPEQAKEE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatcccctgctagcgcaacttaagcaacagatccaagaaaccctgccc
aagaaagagggaacggtgaaagccactgaaaaaggctttggctttttagaagtggacgat
aaaaccagcctctttattccaccaccgtatatgaagaaagtgatgcacggtgatcgtgtt
gaagccttcgttcgcacagaaaaagagcgtgaggtcgcagagccggatgccttgattgag
caaagcattgaccgctttattggtcgcgttcagtggattcgtaaccgtctcaatattgtc
ccggatcatccgcaaatcaaagatgctatccgcgccaaaacccagcgcggcttatcgcaa
gacgaacttaaagatggcgactgggttgtcgcatccctgatccgtcacccactcaaaggc
gacgacaacttcttctgccaagtcagtgaaaaaatcaccgatgccaatgacaagattgcg
ccttggtgggtcacgctagcaaaacataacttaccaaaccaagagcctgcgcctaaagaa
gcatgggcgatgttggagcaaggtttagagcgccgcgatctgaccgcgctccccttcgtg
accattgatagcgaatcgaccaaagatatggacgatgcgttatatgtaaaagccaacgag
caaggcggctttaccatgacagtcgcgattgccgatccgactgcgtatatcgatgcggat
gacgaccttgaccaagtggcccgcagccgcggctttacgatttacttgcccggtcgcaat
atcccaatgttgcctcgcgatctgagtgacgatttgtgttcactacgtgcccacgagaaa
cgtccggcgctttgctgtaccttcaatatcgctgccgatggcaccattgccgatgacgcc
gagtttttctcagcatggatccaatcacacggccagctagcctacgacaaggtgtctgac
tacatcgagcaaggtgaacaagcagcatggcagccagagagcagcgacatcgcggatcaa
atccatcagttgcatcagtttgcacttgctcgcattgaatggcgtgaaacgcatgcggtg
accttccccgatcgtccagactatcgctttgaactcagcgaagataacgatgtgatcgcg
attcacactgacgcgcgccgcatcgctaaccgtatcgttgaagaggcgatgatcagcgct
aacatttgtgcgggtcgcaaactgcgtgaatcgttcggtttcggtatttttaacacccac
gcaggctttaacagtgacaagctggacgatgtggtcgagttggtcaaagcccatgaagga
gaagccgatagcgaaagtttggcaaccgttgaaggctttagcgcattgcgtcgttggtta
aacagcctcgacagcacgtatctcgacaaccgcctgcgtcgtttccaagcgtacagtgaa
attggtcacgagccagctcctcactacgcgatgggccttgatgtctacgctacatggaca
tcgcctatccgtaagtacggcgatatgattaaccaccgcttactcaaagcgagcattcgc
ggcgaaagcgaagctaatgcccctgcggatacggtcggtgaagaactggctggtcatcgc
aaacaccaccgcatggccgagcgcgatgtcgctgattggctgtacgtccgtttgttgaag
ccagaagtggaagcacaaacccgttacacagcggaaatctttgatattaatcgcgcgggt
atgcgtgttcgcctactcgaaaatggcgcaccggcgtttatcccatcgtcgctgatcatc
gataacaaaacccgcattgcctgtgataaagaaactggcacagtgaccattgatggcaac
gttgagtttaagcttggcgacagcctagaagtggtgattgcggatatcaaagaatccacg
cgctctattgtggcaaaaccaacccaagtgtttgcgctgcctgagcaagcgaaagaagaa
taa
DBGET
integrated database retrieval system
