KEGG   Salinivibrio sp. YCSC6: E8E00_17020
Entry
E8E00_17020       CDS       T05946                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
saly  Salinivibrio sp. YCSC6
Pathway
saly03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:saly00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E8E00_17020 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:saly02044]
    E8E00_17020 (tssH)
Secretion system [BR:saly02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E8E00_17020 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_7 AAA_22 TniB NBD_SMAX1 AAA_25 NACHT bpMoxR nSTAND3 AAA_14 Sigma54_activat Ras Clp_N ResIII AAA_33 AAA_6 Rad17 AAA_11 FtsK_SpoIIIE SRP54
Other DBs
NCBI-ProteinID: QCF37881
LinkDB
Position
II:717175..719799
AA seq 874 aa
MIRIELSTLISKLNEQSKLALEQAASLCIERQHPEVLIEHFIEVLLDNPLSDVRLIVKQA
NVEVEALKQALSSSYERDKALDTYPAFSPLLVEVLQEAWLLSTTELDQSELRSGIVFYAV
LNRADRYLSRPAAKLLDGINRESLKKHFNAIVADSAETAVDTNAAAKKHAPSLEGSESPL
YKYCSNITAQAKNGELDPVLCREEELNLMVDILCRRRKNNPIVVGDAGVGKSAMVEGLAL
RIAAGNVPEKLKHVELFSLDLGLLQAGASVKGEFEKRLKGVIDGIKTAPNPIILFIDEAH
TLIGSGNQEGGSDAANLLKPALARGELSTIAATTWKEYKKYFEKDPALTRRFQLVKLEEP
SVDQAVNIMRGLGSAYEKAHGVIIADEALKAAAELSARYLSGRQLPDKAIDVLDTACARI
AINMTTPPKRLALLETLCHQRQQEIEMLKRAEFIGQPVDTERLDELETLEQADEEEKRLL
SSRWNEQRELVEEIVSLRAKLLDKDSADVSDDADEACDYDALAKALSEKYAALDAIPHDE
RLMHPHVDAEQVAEVISDWTGVPVDQMNSDELYKITNLTTLLGKAIKGQDIAIERVHRHL
LTARADLRRSGRPKGAFLLVGPSGVGKTETVVQLAQQLYGGKQFLTTINMSEYQEKHTVS
RLIGSPPGYVGYGEGGVLTEAIRKMPYSIVLLDEVEKAHPEVLNIFYQAFDKGELADGEG
RVIDCQNTVFFLTSNLGYQTIVDHADDQANLDNALYPELAAFFKPALLARMEVVPYLPLG
KDVLADIVRGKLTHLEQTFAQRYGATVDIHESLIDEILQRATRSENGARMLEAIIEGQLL
PPVSLSLLNKLAEKSDISHVRLYAEEGEFKGEVE
NT seq 2625 nt   +upstreamnt  +downstreamnt
gtgattcgaattgaattatctacgctaatttcaaaattgaatgagcaaagtaaacttgct
cttgagcaagcggcctcgctctgtattgaaaggcaacatccagaagtattgattgaacac
ttcatcgaagtgttgctggacaatccgctttctgatgttcgtttgatcgtaaaacaagcg
aacgttgaagttgaagcactaaaacaggcgctttcttcgagctatgagcgtgacaaagca
ctagacacgtatcctgccttttccccactactggttgaagtattgcaagaggcttggttg
ctgtcgacgactgaattggatcaatcggaattgcgctcgggtattgtattttatgccgta
cttaaccgcgccgatcgttacctttctcgtccagccgccaagctgttggatggcattaat
cgtgaaagtctaaagaaacattttaacgcgattgtggctgattccgcagaaacggcggtt
gatacaaatgcggcagcgaaaaagcatgcgccttctctcgagggcagtgaatctccgcta
tacaaatactgttcaaacattacggcacaagcaaaaaatggcgagctcgacccggtctta
tgtcgagaggaagagcttaacttgatggttgatattttatgccgtcgtcgtaagaacaac
cccattgttgtaggtgatgcaggggtgggtaaaagcgcgatggtcgaaggtctggcattg
cgcattgcagccggaaatgttccggaaaaacttaagcacgttgagttattcagcttagat
ttaggcctacttcaagctggcgcctctgtgaagggtgagttcgaaaaacgcttgaaaggg
gttatcgatggtatcaagacggcacccaacccaattattctctttatcgatgaggcgcac
acgcttatcggttcaggaaaccaagaaggcggtagtgacgcagcaaacttgctcaagcca
gcattggcgcgaggtgagttaagtaccattgctgcaacgacttggaaggaatataaaaag
tacttcgagaaagatcctgcacttactcgtcgtttccaactggtgaaattggaagagcct
tctgttgatcaagcggtcaacattatgcgtggtcttggtagtgcctatgaaaaagcccac
ggcgttattattgctgacgaggcgttaaaagcggctgcagagctttctgctcgctacctt
tcaggacgacagctccccgataaagccattgatgtgctagatacggcatgcgctcggatt
gctattaacatgacgacgccaccgaagcgcttagcgttgcttgaaacgctttgtcaccaa
cgtcaacaagaaatcgagatgctgaagcgcgcagagtttattggccagccggtagacacg
gaacgtctcgatgaattggaaaccttggagcaggcggatgaagaagaaaagcgtcttctc
tcatcacgctggaatgagcaacgcgagttggtagaagaaattgtatccttacgcgccaag
ctgttagacaaagatagtgctgatgtcagtgacgatgcggatgaagcgtgtgattatgac
gcactcgcgaaagcgctgtcagaaaaatatgcggcacttgacgcgattcctcatgatgag
cgtcttatgcacccgcacgtggatgcggaacaagtcgctgaagtgatttctgattggaca
ggtgtgcctgttgatcagatgaacagtgatgagctttacaagatcaccaacctgacaaca
ctgcttggaaaggcgatcaaagggcaagatattgccatcgaacgtgttcatcgtcacttg
ctgacagcacgtgcagatctgcgtcgttcaggccgaccgaaaggcgcatttttactggtt
ggtccaagcggtgtgggtaaaaccgaaaccgttgtgcagcttgctcaacagctctacggt
ggtaagcagtttttaaccacgattaatatgtcggagtaccaagagaaacacacggtttca
cgtttgattggctctcccccaggctacgtgggctatggcgagggtggtgtactgactgag
gcgattcgtaaaatgccttattcgatcgtactgcttgatgaagtcgagaaagcgcaccca
gaagtattgaatatcttctatcaagcctttgataagggtgaactggcagatggcgaaggc
cgtgtgattgactgtcaaaacaccgtattctttttgacctcgaacctcggttatcaaacg
atcgttgatcatgctgatgatcaagcgaaccttgataatgccttgtatccagaacttgcg
gctttctttaagccggcactgcttgcacgtatggaagtcgtaccttacttgccactaggc
aaggacgtactcgcggatattgtgcgaggtaaactcactcacctcgaacagacatttgct
cagcgttatggcgcaacggttgatattcatgaaagcctgattgacgagatattgcagcgc
gcgactcgcagtgaaaacggggcacgtatgctggaagcgattatagaaggtcagttactg
cctcctgtttcgctatctctgcttaacaaactggctgagaaatcagatatctctcatgtg
cgtttatacgccgaagagggtgagtttaaaggcgaggttgagtaa

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