Salinivibrio sp. YCSC6: E8E00_17025
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Entry
E8E00_17025 CDS
T05946
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saly03000
]
E8E00_17025
Transcription factors [BR:
saly03000
]
Prokaryotic type
Helix-turn-helix
Other families
E8E00_17025
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA_16
AAA
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QCF37882
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Position
II:719802..721394
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AA seq
530 aa
AA seq
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MRNWLAYVTDLAKERRTVDLQSRFIQIVVGELKLREGMLLTPSCDGRQLVCHASDTSWSV
TDFDTPFAHVLQNVVPMHLGAEDIVYWQSNRAFAEFVGELGLFEAVNIYPLVRRDTNTKL
VVCLVGDSDPLSSLWHDDPGFSQFVDVFVNQWSLLSEMEGEESRRRALRASLSDIEKRAH
QQKQAASLSVTLIGDSAPMLRLRDQIANAASSHLSVLVQGETGSGKELVARAVHDLSSRN
TQPFVPINCAAIPEHLLESELFGHVKGAFSGAVNHKEGLIAQANGGTLFLDEIGDMPMSL
QAKLLRVLESGTFRPVGGHQEQQSDFRLVSATHVHLLEKVRAGEFRQDLYYRLLQYPLHV
PALAQRKEDIRQLCFHFIQQFNQQHGTSIRDIHFQALDALLGYSFPGNVRELKHLIEYAC
AQTANGEAIKLATFGARLNMSVSSSPAPAPATDDVRSVCDSNGLSTSSRVLNIDAASIGD
LKQALMDFEQRIIADRLSQFGGDTAKVAESLGIPRRTLTYKCRKLEIKAP
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaattggctggcttatgtgactgacctagcgaaggaaaggcggactgtcgatcta
cagtctcgctttatccaaatcgttgtcggtgagctcaagctacgcgaaggaatgctactc
acacccagttgcgatggcagacagcttgtctgccacgcatcggatacgtcttggtcagta
acggattttgacaccccctttgctcatgttcttcaaaatgtcgtccctatgcatttaggt
gcggaagatattgtttattggcaatcaaatcgagcgtttgctgagtttgtcggtgagctt
ggtttgtttgaagccgtcaatatttatcctttggtacgtcgtgacacgaatacaaagctt
gttgtttgtctagtgggagatagcgatcctctatcttcgttgtggcacgacgacccaggt
ttcagtcaatttgtggatgtgtttgtgaatcagtggtctctacttagtgaaatggaaggc
gaggagagccgtcgtagagcgttaagagcctctctttctgatatcgaaaaaagggcgcat
cagcaaaagcaagcagcgagcttgtctgtcacgcttatcggagacagtgcacctatgctg
cgtcttcgtgaccaaattgctaatgcggcatcatcgcatctctctgtgctcgttcaagga
gagacaggaagtggtaaagagttggtcgcgcgcgccgttcacgatctatcaagccgaaat
actcagccatttgtgcctatcaattgcgcggctatcccagagcacttgctcgagagtgaa
ctatttgggcatgtgaaaggggcattctctggcgccgtgaatcataaagaagggcttatt
gcacaagcgaatggcggcacgctctttttggatgaaattggcgatatgccaatgagcttg
caagcaaagttactcagggtactggagtctggaacatttcgacctgtcggaggacaccaa
gagcaacaatcagatttccggttggtatcggctactcatgttcatctacttgaaaaagtg
cgtgcaggcgagtttcgacaagatctgtattatcgcttactgcaatacccgctacatgta
ccagcacttgcgcagcgtaaggaagatatacggcagctatgtttccactttattcaacag
tttaatcagcaacatggcactagcatccgtgatattcatttccaagcgttggatgcgcta
cttggctatagcttccccggtaacgtgcgcgagctaaaacatttaatcgagtatgcctgc
gcgcaaacggcaaatggcgaggcgataaaactggcaacctttggtgcgcgcttgaatatg
tcggtaagcagttccccagccccggctccagcaaccgatgatgtccgctccgtttgtgac
tctaatgggctatcgacatcgagccgtgtgctgaatatcgacgctgcgtcgattggcgac
ctgaaacaagcattgatggattttgaacagcgcattattgcggataggttgtcgcagttt
ggtggtgataccgccaaagtggcggaaagcttaggtatcccgagaagaacattgacttat
aaatgtcgaaaattagagataaaagcgccatga
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