KEGG   Salinivibrio sp. YCSC6: E8E00_17040
Entry
E8E00_17040       CDS       T05946                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
saly  Salinivibrio sp. YCSC6
Pathway
saly03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:saly00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E8E00_17040 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:saly02044]
    E8E00_17040 (tssM)
Secretion system [BR:saly02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E8E00_17040 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QCF37885
LinkDB
Position
II:723497..727042
AA seq 1181 aa
MWKHLFKIAKKLKPGMLAAFPILLVAIFILVNVAIWWAGPWLTLGEQKPLASIAARAICS
GFITLGALAIWGVWQWRKLQGFKAEQEHAERLREDPIQVYEERQQSELDQVVANMKQNLN
KRNHLYALPWYLVLGLENAGKTSLINRSGQNFVFSSVMRASGQKSENPYSFDWWIGDESV
LIDPDGELLTQGNKDENNDGELERRLWLHFVKWLEQTRSRRPLNGIVLTLDASHLATATA
SERKAYANLLRARLRELMETLSTRLPVYIALTKLDLLYGFEPFFKHYSKQQRDEVLGFTF
SLNSVDDLDSWLKEFDEAYSGFIDRVNAIVPHALATPLDFEDRKAIYSFSRQIAGLKEIL
ATFFNEALASDQFSTSALVRGAYFTSVYQQGVPTNAFDDAASRRYGLSHAVNRAQKSKNS
TVYFTQRLFSNIIYPEAGLASDNFRVAKHKRRLIGMSVLACSIATVLLAGTWHRYYLANV
AHADAVLTKVDQYKTQFPSNAAGASQQEVLKPLNQIRQATLEFGFFRDKPKYISDFGLYQ
GHVIGPKVEQTYLNLLKSRFLPLLMADTVVDLNQATTDQERLVALRVYRMMVDKSGRYHD
YVMDYFSQQWQREFAGQKTIQERLLGHLDYAMRHTDLTDARRQGDEVAERVMRPYDMTIA
RAQADLRTMPTDQRVYRNLKLDAETVLGAPMNLRNSVGPVFDVVFEERVVNSENLYIPQM
LTKKGFEEYFVPKLQSVSDLALIDSWVLGEAETAEFSEADKKALRNKIRDLYVADYTNTW
RTALNEIDVKFFSDINDAVTVLDNFTGHVGPLQRLLRTLETNTQLASGLGLDEDAQDAIA
ENPKYNVASQIQAPFSDLNSLVKAVNDKPAYLSEVLASVQELKSYLKSIQDAPDVGTAAL
DATKARVKLVNTDPIYTLKRIATGLPEPLDGMVDKLADESWHVVKQAAIQHLEVRWYQDV
YRPYQQKLANRYPFNPQASKDASLSDFESFFAPGGTLDSFYNNQLKMFIDENISVGNSGI
DGSLIRQDLLAQIRQAQKIREAFFNRKGILDVSFSVEPLRLSSNKRRSVLNIDGQYVTYS
HGPRDSIELIWPNTLRDSATSKLTLVPTKTNLSPRSVVIRGPWALFRLLDQGAVVSASAT
SVDYQFNVDGGGMIYRVNAQAATNPFTQRLFKSFKLSRNLY
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgtggaaacatcttttcaaaatagcgaaaaagctgaagcctggaatgcttgcggctttt
cctattttattggttgcgatatttatccttgttaatgtcgccatatggtgggcaggtcct
tggctaacactcggtgagcaaaagcctcttgcatctatcgcggcgcgtgcgatctgcagt
ggctttattacactcggggcgttggcgatttggggtgtttggcaatggcgtaagctacaa
ggtttcaaagcggagcaagagcacgctgagcgactacgcgaagaccctatccaagtatac
gaagagcgccaacagtctgagcttgatcaagttgttgcgaacatgaagcaaaacttgaac
aagcgaaaccatctttacgcacttccatggtacttagtgctgggcttggaaaacgccgga
aaaaccagtcttattaatcgctctgggcaaaacttcgtgttttcgtctgtgatgcgagcc
tctggtcaaaaaagcgaaaacccatattcatttgattggtggataggggatgaatcggta
ttgattgaccctgatggcgagctactcactcagggcaacaaagatgaaaataacgacggt
gaattagagcgccgtctgtggttacactttgttaagtggctggaacaaacacgcagtcgt
cgtccacttaatggcatcgtgctgacgctagacgcatcacacctagcgacggcgacagcg
tctgaacgtaaagcttacgctaacttgctgcgtgcgaggttgcgcgagttgatggaaacc
ctgtcgacgcgattgcctgtttatattgccttaactaagctcgacttactgtatgggttt
gaacccttctttaagcattattcgaagcagcagcgcgatgaagtgcttgggtttactttc
tctctaaactcagtggatgacttagactcgtggttaaaagagtttgatgaggcatacagt
ggctttatcgacagggtaaatgcgatcgtgcctcacgcactggcaacaccgctcgacttt
gaggatcgcaaagcgatatacagcttctcacgccaaattgcagggctgaaagaaatattg
gccaccttctttaatgaagcgttagcaagcgatcagttctcaacatccgcactggtgcga
ggggcctatttcacatcggtatatcaacaaggtgtcccaaccaatgcctttgatgatgcg
gcttctcgccgttatgggctctcgcatgcggtgaaccgagcgcagaagtcgaaaaactcg
actgtttattttacgcaacggcttttcagcaacattatttatccagaagcaggactcgcg
tctgataatttccgggtggcgaagcataagcgacgtctcatcggcatgtcggtgttagct
tgctcaattgcaaccgtgctgctcgcggggacgtggcatcgctattaccttgccaacgtc
gcgcatgcggatgcggtgctaacaaaagtcgaccagtataagacgcaatttccgagtaat
gcggcaggagcatcgcaacaagaagtattgaaaccgctgaaccagatccgacaagccacg
ttggaatttggttttttccgagataagccgaagtatatctctgactttggtctctatcag
ggacatgtaattgggcctaaggttgaacaaacgtacttgaacttattgaagagccgtttc
ttacccctgctgatggcggatactgtggttgatcttaaccaagcaacgacggatcaggaa
agactcgtggcgttgcgtgtgtatcgcatgatggtggataagagtggtcgctatcatgat
tacgtaatggattattttagtcagcaatggcaacgagagtttgccgggcaaaaaactatc
caagaacgtttgttaggacacttagattatgcgatgcgtcataccgatctgacggatgcg
cgtcgacaaggcgatgaggtcgcagaacgggttatgcgtccttatgatatgacgattgcg
cgcgcgcaagctgatttgcgcaccatgccaaccgatcaacgtgtttatcgtaatcttaaa
ctcgacgctgagaccgtactcggcgcgccaatgaacttgcgtaattcggtaggccccgtc
tttgatgtggttttcgaagaacgagtggttaacagcgaaaatctgtatattccacaaatg
ctgactaaaaaaggctttgaagagtattttgtaccaaaactgcaatccgtttctgacctc
gcgttgatcgacagttgggtactcggcgaagccgaaactgcggagtttagtgaagcagat
aagaaagcgctaaggaacaagattcgcgatctttatgttgcggattacaccaatacatgg
cgaacggcactgaatgagattgacgtgaaattcttcagtgatatcaacgatgccgttact
gtattggataactttactggtcacgttggaccgctgcagcgcctattgcgtacgttggaa
accaatactcagcttgcatcagggctgggattggatgaagacgcgcaggacgcgattgca
gagaatccaaaatacaatgtcgcgtctcagatccaagcgccgttttctgacttaaatagc
cttgttaaagcggtcaatgacaagcctgcctacttgagtgaagtactggcgtccgtgcaa
gaactcaagagctaccttaagtctattcaggatgcgcctgacgtcggtacggccgcgctc
gatgcaactaaagcgcgtgtgaagctggtaaacaccgatcctatttatacgctaaaacgt
attgccacaggtctaccagaaccgctggatggcatggtcgacaaactggcagatgaaagt
tggcatgttgtaaaacaggcggcaattcagcatcttgaagtccgctggtatcaagatgtt
tatcgtccttatcaacaaaagctggctaatcgatatccgttcaatccgcaggcgagtaaa
gatgcatcactcagtgactttgagagcttctttgcgccgggtgggactttggatagcttc
tataacaaccagcttaagatgtttattgatgaaaacatctctgtgggtaacagcggcatt
gacggttcattgatccgccaagacttgcttgctcagatccgtcaagcacaaaagattcga
gaagcattcttcaaccgcaaaggtatcttagatgttagcttctccgttgaacctcttcgc
ttgagcagtaataagcgtcgtagtgtgttgaatattgatgggcaatatgtgacctatagc
cacggcccgcgagacagtatagagctgatctggccgaatacactgcgagactcggcaaca
tcgaagttgacgttggtaccgacaaaaaccaatttgtctccacgcagtgttgtgatacgt
ggtccgtgggcattattccgtcttctcgatcaaggtgcggtcgtatcggcaagtgcgaca
tctgttgattatcaattcaacgttgatggtggcggaatgatttaccgcgttaatgcgcaa
gccgcgactaacccattcactcagcgtttgtttaagtcctttaaactttcacgcaacctt
tactaa

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