Salmonella sp. SSDFZ69: EOS98_04405
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Entry
EOS98_04405 CDS
T06160
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
salz
Salmonella sp. SSDFZ69
Pathway
salz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EOS98_04405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salz03019
]
EOS98_04405
Messenger RNA biogenesis [BR:
salz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EOS98_04405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AZY96889
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Position
885837..886367
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMSADAEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccaaatgtaggtatcgtaatttgtaatcgtcagggg
caggtgatgtgggcccggcgatttggtcagcactcctggcagttcccgcagggcgggata
aatccaggggagtcggcagaacaggcgatgtaccgggaactgtttgaagaagttgggtta
agccgtaaagatgtgcggatccttgcttctactcgcaactggttgcgttacaagttacca
aaacgtttggtgcgttgggacacaaagccggtatgtatcggccagaaacaaaagtggttt
cttttgcagttaatgagcgccgacgccgaaatcaatatgcaaaccagcagtacgccggag
tttgacggctggcgctgggtaagttactggtatccggttcgacaagtggtgtcatttaaa
cgcgatgtctaccgcagggtaatgaaagagtttgcaagtgttgtcatggcgcttcaggat
aatccccctaagctacaaagcgcgcctgcttatcgacgtaaaagaggttaa
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