Salmonella sp. SSDFZ69: EOS98_18035
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Entry
EOS98_18035 CDS
T06160
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
salz
Salmonella sp. SSDFZ69
Pathway
salz00310
Lysine degradation
salz01100
Metabolic pathways
salz01110
Biosynthesis of secondary metabolites
salz01120
Microbial metabolism in diverse environments
Module
salz_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
salz00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
EOS98_18035
Enzymes [BR:
salz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
EOS98_18035
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AZY99344
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Position
complement(3604479..3606620)
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVYYKDEPIKELERALQSLGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTNSTLDVSVHDMRMALWFFEYALGLAEDIATRIHQY
TNEYLDNITPPFTKALFTYAKEGKYTFCTPGHMAGTAYQKSPPGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPKREFTRDSIARKVAETAQAQWPVH
AVITNSTYDGLLYNTNWIKQMLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGDRVPGKVIF
ETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDSWFFDIWQPEEVDEAECWPVTPGETWHGFADAD
DDHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLPGLMLRAFEVLPEMIMTPHQAWQRQIKGEVETVALDQLPGRVSANMILPYPPGVPLLM
PGERITQQSRAVLDFLLMLCSIGQHYPGFETDIHGAKRNEDGVYQVRVLKHAC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatcgccattatggggccgcacggggtttattataaagatgaacccatcaag
gagcttgagcgtgcattacaatccctgggatttcaaattatctggccgcaaaatagcgtt
gacttgttgaagtttattgaacataacccgcgcatctgcggcgttatttttgattgggat
gaatacagtctcgacctttgtagcgaaatcaaccagctaaatgaataccttcctctctac
gcctttatcaataccaactccacgctggacgttagcgttcacgatatgcgcatggcgctg
tggttttttgagtatgcgttggggctggctgaagatatcgcgacgcgcattcatcaatat
acaaacgaatatctcgataatattacgccaccgtttaccaaagcgctgtttacctacgcc
aaagaaggaaaatataccttttgtacgccgggtcatatggcgggaacggcgtatcagaaa
agtccgccaggctgtctgttttatgacttttttggcggcaataccttaaaagctgatgtg
tcgatttcggtgactgaactgggatcgctgctggatcacaccgggccgcatctggaagcg
gaagagtatatcgcccgtacttttggcgccgagcagagttatatggtgacgaacggtacg
tcgacctcgaataaaattgtcggtatgtatgccgcgcctgcgggaagtacgctacttatt
gatcgtaattgccataaatcgctggcgcatttgctgatgatgagcgatgtggtgcctctc
tggttgaagccgacgcgcaatgcgctcggtattctcggcggtattcctaagcgtgaattt
acccgcgacagcattgcgcgtaaggtggcggaaaccgcgcaggcgcaatggccggttcat
gcggttatcaccaattcgacttacgatggtctgctgtataacactaactggatcaagcag
atgctggacgttccctcgatccattttgattccgcctgggtaccctatacccatttccat
ccgatctaccaggggaaaagcgggatgagcggcgatcgggtgcccggaaaagtgattttt
gaaacgcaatccacccataaaatgctggcggctttttcgcaggcgtcgcttattcatatc
aaaggggaatatgacgaagaaacgtttaacgaagcgtttatgatgcacacttccacatcg
ccgagctatcccattgtcgcctctatcgagaccgcggcggcgatgctgcgcggcaatcca
gggaaaagattgattaatcgttcggtggaacgggcgctccattttcgtaaagaagtacag
cggttacgtgaagagtccgatagctggttctttgatatctggcagccggaagaggttgat
gaggccgaatgctggccggtcacgccgggagaaacctggcatggcttcgccgatgccgat
gacgatcatatgttcctcgatccggttaaggtgacaatcctgacgccggggatggatgaa
cagggcaacatgagcgaagaggggatacccgccgcgctggtggcgaagttcctcgatgag
cgaggcgtagtggtggaaaaaaccgggccgtataatctgctgtttttgttcagcataggg
attgataagacccgtgcgatggggctgctgcgcggactgacggaatttaaacgcgcctac
gatcttaacctgcgcgtcaaaaatatgttgccggatctgtatgcggaagatccggatttt
tatcgcaatatgcgcattcaggatctggcgcaggggatccataaactgatccgccagcac
gatcttccggggctgatgctgcgggcgttcgaggttttaccggagatgattatgaccccg
caccaggcctggcagcgtcagatcaaaggcgaggtggaaaccgtggcgctcgatcaactg
ccagggcgcgtttccgcgaatatgatcctgccttatccgccaggcgttccgctgttgatg
cccggcgagaggatcacgcaacagagtcgggccgtgctcgattttctgctgatgctctgc
tcgattggccagcattatcccggttttgaaacggatattcacggcgcgaaacggaatgaa
gacggggtgtaccaggtacgagtcttaaaacacgcctgttag
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