Salmonella sp. SSDFZ69: EOS98_21835
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Entry
EOS98_21835 CDS
T06160
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
salz
Salmonella sp. SSDFZ69
Pathway
salz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EOS98_21835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salz03400
]
EOS98_21835
Enzymes [BR:
salz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EOS98_21835
DNA repair and recombination proteins [BR:
salz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EOS98_21835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AZZ00034
LinkDB
All DBs
Position
4419125..4421323
Genome browser
AA seq
732 aa
AA seq
DB search
MSVAHVALPVPLPRTFDYLLPEGGVAKAGCRVRVPFGKQQERVGIVVSVSDHSELPLDEL
KSVIEIVDNEPIFSPSIWRLLLWAADYYHHPLGDVLFHALPVLLRQGKPASNAPLWYWFA
TEEGQAVDINSLKRSAKQQQALAALRQGKIWRYQVAELDFTDATLQTLRRKGLCELASET
PAFTDWRERYAVAGERLRLNTEQATAVGAIHSASDGFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVRQKKYRMLRLTRRAGNAHPALQHVLDLKGQRLQAGLAPALIARMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG
STHMLPVGLGTEQLEQVLAPFFPGVPISRIDRDTTSRKGALEQHLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERQTLQLPPWTSHVIIRAEDHNNQQAPVFLQQLRNLI
QASPLSDDKLWILGPVPALAPKRGGRYRWQILLQHPSRIRLQHIISGTLALINTLPEARK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgcgcacgttgccttgcccgttccgcttccccgaacctttgattacctgctg
ccggaaggcggggtcgccaaagccgggtgccgcgtgcgcgtgccgttcggcaagcagcaa
gagcgcgtgggcattgtcgtctcggttagcgaccacagcgaattgccgctcgatgaatta
aaatcggtcattgaaatcgtggataacgagccaatcttttctccctccatctggcgctta
ctcctctgggcggcggattactaccaccatcccctcggcgacgttctgtttcacgctctg
ccggttttactgcgtcagggaaaaccagccagcaacgcgcccctatggtattggttcgcc
accgaagaggggcaagccgtcgacatcaacagcctgaaacgctccgccaaacaacaacag
gcgctggcggcgctgcggcaaggaaagatctggcgctatcaggtagccgagcttgatttt
actgacgccacgctgcaaacgctgcggcgtaaggggctttgtgagcttgccagtgaaacg
cccgcgtttaccgactggcgggagcgttatgccgtcgcaggagagcgcctgcggctgaat
accgaacaggcgacagcagtcggcgcgattcacagcgcgtcggacggtttctccgcctgg
ttgctggcaggcgtaaccggttccggcaagaccgaagtgtatctgagcgtgctggaaaac
gtcctcgcccagggcaaacaggcgctggtgatggtaccggaaatcggcctgacgccgcaa
acgatcgcccgttttcgcgaacgttttaacgcgccggtggaagtgctgcattccgggcta
aacgatagcgagcgtctttcggcatggctgaaagcgaaaaacggcgaagcggcgattgtc
atcggcacgcgctcctcgctgtttacgccgtttaaaaatcttggcgtaattgtcatcgac
gaagagcacgacagctcttataaacagcaggaagggtggcgctaccatgcccgcgatttg
gctgtgtatcgcgcccatagcgagcagatcccgattattctcggctccgccaccccagcc
ctggaaacgctatgcaacgtgcggcagaaaaaataccggatgctgcgtctgacgcggcgc
gcaggcaacgcccacccagccctgcagcatgtgctggatttaaaaggccagcgtcttcag
gcgggactggcgcccgcccttatcgcccgtatgcgccaacatctccaggccgacaatcag
gtaattttatttcttaaccgccggggattcgcgcccgcgctgctttgccacgactgcggc
tggattgcggagtgcccgcgttgcgatcactactacacgctgcaccaggcgcagcatcat
ttacgctgtcatcactgcgacagccaacgtccggtaccgcgtcagtgcccctcctgcggc
tccacacatatgctaccggttgggttagggacggaacagttggagcaggtgctggcgccc
ttcttccccggcgtgccgatctcacgaatcgaccgtgataccaccagtcgtaaaggcgcg
ctggagcagcatctggcggaagttcaccgcggcggagcgcgcattctgataggcacacaa
atgctggcgaaaggccatcactttcctgacgtcacgctggtggcgttgctggatgtcgat
ggcgcgcttttttccgcagattttcgttcggcggaacgcttcgcccagctctacactcag
gtttccggccgcgccgggcgcgcgggcaaacagggcgaagtggtgctccaaacgcaccat
cctgagcatcccctgctgcaaacgttactgtataaaggctatgatgcgtttgcggaacag
gcgctggcggaacggcaaacgctccagcttccgccgtggaccagccacgtcattattcgc
gcagaggatcacaacaatcagcaggcgcccgtctttctccagcagttgcgtaatctgatt
caggccagcccgctatcagacgataagctgtggatcttaggtccggttccggccctcgcg
ccaaaacgcggcggccgctatcgctggcaaattttacttcagcatccttcacggattcgc
ctgcaacacatcatcagcggcacgctggcgttgatcaatacgctccctgaagcgcggaaa
gttaaatgggttcttgacgtcgatccgattgaaggatag
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