Salmonella sp. SSDFZ69: EOS98_21940
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Entry
EOS98_21940 CDS
T06160
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
salz
Salmonella sp. SSDFZ69
Pathway
salz02010
ABC transporters
salz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
salz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EOS98_21940 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EOS98_21940 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salz02000
]
EOS98_21940 (lsrA)
Transporters [BR:
salz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
EOS98_21940 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_30
AAA_22
RsgA_GTPase
AAA_29
KdpD
MukB
eRF1_3
PhetRS_B1
AAA_23
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AZZ00055
LinkDB
All DBs
Position
complement(4439651..4441186)
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AA seq
511 aa
AA seq
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MQISHNTASPLICVQNIYKSYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGI
VPPDGGTIDIAGVRCSHLTPLKAHQYGIYLVPQEPLLFPSLSVRENILFGLQGRQASTEK
MQQLLKAMGCQLDPASAAGTLDVADRQIVEIMRGLMRDSRILILDEPTASLTPAETDRLF
TRLQELLKKGVGIVFISHKLPEIRQLAHCVSVMRDGKIALFGKTHDLSTDEIIQAITPAT
QGVSLSANQKLWLELPGSRPQNERGATVLALESLTGEGFMNINLEVRAGEILGLAGLVGA
GRTELAETLYGIRPVNAGRMLFNGQEINALTTQQRLQLGLVYLPEDRQSSGLYLDASLAW
NVCSLTHNQKGFWIKPQRDNATLERYHRALNIKLNNAEQAARTLSGGNQQKVLIAKCLEA
SPQLLIVDEPTRGVDVSARSDIYQLLRSIAQQNVAVLFISSDLEEIEQMADRVYVMHQGE
LGGPALCGEEINVDTIMHVAFGEHGASEATC
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcagtcacaatactgcatcccctctgatttgtgtgcagaacatttataaaagt
tattccggcgtcgaagtactaaagggaattgactttactctgcatgcgggagaggtgcac
gcattgcttggcggcaatggtgcgggtaaatcaacattaatgaagattattgccggtata
gtcccgccagatggagggactatcgatattgctggtgtgcgttgcagtcatttaacgcct
ctgaaggcgcaccagtatggcatttacctggttccccaggagcctctgttatttccgagt
ttatctgtgcgggaaaatatcttgtttggcttacagggacgtcaggcctccacggaaaaa
atgcagcagctattaaaggcgatgggatgccaactcgatccggcgagcgctgcgggtacg
cttgatgttgcagaccgccagatcgttgaaattatgcgcggcttgatgcgcgactcgcga
atcttaattcttgatgagcccacggcgtcgttaacgccagccgaaactgaccggttattt
acgcgtctgcaagagttgctgaaaaagggtgtcggaattgtatttatttctcataagcta
ccagaaattagacagttagctcactgcgttagcgtgatgcgtgacggtaaaatcgcatta
ttcggaaaaacgcatgacctttctaccgacgagattattcaagctatcaccccggcaacg
cagggcgtcagtctttctgcgaatcaaaagttgtggctggaattgcctggcagccgcccg
cagaacgaacgcggcgcgacggtattagcgctggagtcactgacgggcgaaggttttatg
aatatcaaccttgaggtgcgggcaggcgaaatccttggtctggccgggttggtcggcgcg
ggacgcacagaactggctgaaacgctgtacggtattagaccggtcaatgcggggcggatg
ctgttcaatggtcaagaaattaacgccctgacaacccaacagcggttgcagctcggcctg
gtctatttgccggaagatcggcagtcatccgggctgtatcttgacgcttccctggcatgg
aatgtctgttcgctgacccacaaccaaaaaggattttggataaagccccagcgggataac
gccacccttgaacgttaccaccgcgcgttaaatatcaaactcaataatgccgaacaggcg
gcgcgtactttatccggcggtaaccagcaaaaagtattgattgccaaatgcctggaagcc
tctccgcaattactgattgtcgatgaaccgacccgcggtgtcgatgtctccgcccgcagc
gatatttatcagctgttgcgcagtatcgcgcaacaaaatgtcgcggtgctgtttatttcc
tccgatctggaagagatagagcagatggccgatcgcgtatatgtcatgcaccagggggaa
ctgggggggcctgcgttatgcggcgaggaaattaacgttgataccatcatgcacgttgcg
tttggcgaacatggtgcgtcggaggcaacatgttga
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