Staphylococcus aureus subsp. aureus MW2 (CA-MRSA): MW0742
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Entry
MW0742 CDS
T00086
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
sam
Staphylococcus aureus subsp. aureus MW2 (CA-MRSA)
Pathway
sam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MW0742 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sam03019
]
MW0742 (rnr)
03016 Transfer RNA biogenesis [BR:
sam03016
]
MW0742 (rnr)
Enzymes [BR:
sam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MW0742 (rnr)
Messenger RNA biogenesis [BR:
sam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MW0742 (rnr)
Transfer RNA biogenesis [BR:
sam03016
]
Prokaryotic type
tRNA degradation factors
MW0742 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_HELZ2
S1CSD-TOTE-2
OB_Dis3
Rho_RNA_bind
RNase_II_C_S1
TBPIP_N
S1_RRP5
OB_RNR_1st
HemN_C
Motif
Other DBs
NCBI-ProteinID:
BAB94607
LinkDB
All DBs
Position
836064..838436
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AA seq
790 aa
AA seq
DB search
MNLKQSIEEIINQPEYEPMSVSDFQDALGLSSADSFRDLIKVLVELEQSGLIERTKTDRY
QKKHSSKGHSKLIKGTLSQNKKGFAFLRPEDEDMEDIFIPPTKINRALDGDTVIVEIHQS
KGEHKGKIEGEVKSIEKHSVTQVVGTYSEARHFGFVIPDDKRIMQDIFIPKGQSLGAVDG
HKVLVQITKYADGSDNPEGHISAILGHKNDPGVDILSIIYQHGIEIEFPDEVLQEAEAVP
DHIENTEIKGRHDLRDELTITIDGADAKDLDDAISVKKLANGNTQLTVSIADVSYYVTEG
SALDKEAYDRATSVYLVDRVIPMIPHRLSNGICSLNPNVDRLTLSCRMEIDASGRVVKHE
IFDSVIHSDYRMTYDAVNQIITEKDPNIREQYKEITPMLDLAQDLSNRLIQMRKRRGEID
FDINEAKVLVNEDGIPTDVQLRQRGEGERLIESFMLIANETVAEHFSKLDVPFIYRVHEQ
PKSDRLRQFFDFITNFGIMIKGTGEDIHPTTLQKVQEEVEGRPEQMVISTMMLRSMQQAH
YDDVNLGHFGLSAEYYTHFTSPIRRYPDLTVHRLIRKYLIEKSMDNKEVKRWEDKLPELA
EHTSKRERRAIEAERDTDELKKAEYMIQHIGDEFEGIVSSVANFGMFIELPNTIEGMVHI
ANMTDDYYRFEERQMALIGERQAKVFRIGDTVKVKVTHVDVDERLIDFQIVGMPLPKNDR
SQRPARGKTIQAKTRGKSLDKSKSDDKGRKKKGSQRKGKNERKNDKSGNSKHKPFYKDKS
VKKKARRKKK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaagcaatcaatagaagagattattaatcaacctgaatatgaacctatgtca
gtgtcagattttcaagatgcattaggtttaagtagtgccgactcatttagagatttaatt
aaggtgctcgtagaattagaacaatcaggattaattgaacgtacaaaaacagacagatat
caaaaaaagcatagttcaaaaggtcattcaaaattgataaagggaacgttaagtcaaaat
aaaaaaggctttgcattcttaagacctgaagatgaggatatggaagatatatttattccc
ccaacaaaaattaatcgtgccttagatggagatactgtaattgtagaaatacatcaatct
aaaggtgaacataaaggtaaaattgaaggggaagttaagtcgattgagaagcattcagta
actcaagttgttggtacgtatagtgaagctagacatttcggatttgttattccagatgat
aaacgtattatgcaagatattttcattcctaaaggacaaagtttaggtgcagtagatggg
cataaggtacttgttcaaattactaaatatgctgatggttcagataatccagaaggacat
atttctgctattttaggacataaaaatgatcctggcgtagatattttatctattatctat
caacatggcatagaaattgaatttcctgatgaagtgttacaagaagctgaagcagtacct
gatcatattgaaaatactgaaattaaaggccgtcatgatttacgtgatgaattgacaatc
acaattgatggtgctgatgctaaagacttagatgacgcaattagtgttaaaaagttagcg
aacggtaatacgcaattaactgtaagtattgctgatgtcagctattatgtaacagaaggt
tctgcattggataaagaggcatatgatagagcgacaagtgtatatcttgttgaccgtgta
attccaatgattccacatcgattaagtaatggtatttgttcattgaatcctaatgttgat
cgtttaactctaagctgtcgcatggaaatcgatgctagtggtcgcgttgttaaacatgaa
atttttgatagtgttatacattctgattatcgaatgacgtatgatgcggtaaatcagatt
attactgaaaaggatcctaacattcgcgaacaatataaagaaattacgcctatgttagat
ttagcacaagatttatctaatcgtttgattcaaatgagaaaacgacgtggtgaaatcgat
tttgatattaatgaagcaaaagtattagttaacgaagacggtataccaacagatgttcaa
ttaagacaacgtggcgagggtgaacgtctaattgaatcatttatgttaattgcaaatgaa
acagttgctgaacattttagtaagttagatgtaccttttatttaccgagtgcatgagcaa
cctaaatcagatcgcttaagacaattctttgattttattacaaactttggcatcatgatt
aagggtactggcgaagatattcatccaacaacacttcaaaaggttcaagaagaagtagaa
ggtcgacctgaacaaatggtcatttcaacaatgatgttgcgttcaatgcaacaagcgcat
tatgatgatgtgaacttgggacattttggcttatcagctgaatattatacgcattttaca
tcaccaattagacgttatcctgatttaacagttcatcgtttaatccgtaagtatttaatt
gagaaatcaatggataacaaagaagtgaagcgttgggaagacaaattgcctgagttagct
gaacatacttctaaacgtgaacgtcgtgctattgaggcagaacgtgatactgatgaattg
aaaaaagcagaatatatgattcaacatattggtgatgaatttgaaggtattgtcagctca
gtagctaacttcggtatgttcattgaattgccaaatacgatagaaggtatggttcatatt
gcgaatatgactgatgattattaccgttttgaagagcgtcaaatggcattaattggtgag
cgtcaagctaaagtatttagaattggtgacacagttaaggttaaagtgacgcatgttgat
gtagatgaacgattaattgattttcaaattgtaggtatgcctttaccgaaaaatgatcga
tcacagcgcccagcgcgaggtaagacaattcaagccaaaacgcgtggtaaatcattagat
aaatcaaaatctgatgataaaggacgtaagaaaaagggtagtcaacgtaaaggtaaaaat
gaacgcaaaaatgacaaatcaggaaatagtaaacataagccattttataaagataaaagt
gtgaaaaagaaagcacgtcgtaagaaaaaataa
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