Staphylococcus aureus subsp. aureus MW2 (CA-MRSA): MW0972
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Entry
MW0972 CDS
T00086
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sam
Staphylococcus aureus subsp. aureus MW2 (CA-MRSA)
Pathway
sam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MW0972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sam03019
]
MW0972
Messenger RNA biogenesis [BR:
sam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MW0972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4152
Motif
Other DBs
NCBI-ProteinID:
BAB94837
UniProt:
Q7A171
LinkDB
All DBs
Position
complement(1068159..1069856)
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AA seq
565 aa
AA seq
DB search
MKQLHPNEVGVYALGGLGEIGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYL
VQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRTAKLN
EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPANIAK
MAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQ
AVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADVIHSKI
SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVFIFDIGD
VLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNKL
LSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIETLQPYLF
EKTARKPMILPVIMKVNEQKESNNK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattacatccaaatgaagtaggtgtatatgcacttggaggtctaggtgaaatc
ggtaaaaatacttatgcagttgagtataaagacgaaattgtcattatcgatgcaggtatc
aaattcccagatgataacttattagggattgattatgttatacctgactacacatatcta
gttcaaaaccaagataaaattgttggcctatttataacacatggtcacgaagaccatata
ggcggtgtgcccttcctattaaaacaacttaatatacctatttatggtggtcctttagca
ttaggtttaatccgtaataaacttgaagaacatcatttattacgtactgctaaactaaat
gaaatcaatgaggacagtgtgattaaatctaagcactttacgatttctttctacttaact
acgcatagtattcctgaaacttatggcgtcatcgtagatacacctgaaggaaaagtagtt
cataccggtgactttaaatttgattttacacctgtaggcaaaccagcaaacattgctaaa
atggctcaattaggcgaagaaggcgttctatgtttactttcagactcaacaaattcactt
gtgcctgattttactttaagcgaacgtgaagttggtcaaaacgtagataagatcttccgt
aattgtaaaggtcgtattatatttgctaccttcgcttctaatatttaccgagttcaacaa
gcagttgaagctgctatcaaaaataaccgtaaaattgttacgttcggtcgttcgatggaa
aacaatattaaaatcggtatggaacttggttatattaaagcaccacctgaaacatttatt
gaacctaataaaattaataccgtaccgaagcatgagttattgatactatgtactggttca
caaggtgaaccaatggcagcattatctagaattgctaatggtactcataagcaaattaaa
attatacctgaagataccgttgtatttagttcatcacctatcccaggtaatacaaaaagt
attaacagaactattaattccttgtataaagctggtgcagatgttatccatagcaagatt
tctaacatccatacttcagggcatggttctcaaggtgatcaacaattaatgcttcgatta
atcaagccgaaatatttcttacctattcatggtgaataccgtatgttaaaagcacatggt
gagactggtgttgaatgcggcgttgaagaagataatgtcttcatctttgatattggagat
gtcttagctttaacacacgattcagcacgtaaagctggtcgcattccatctggtaatgta
cttgttgatggtagtggtatcggtgatatcggtaatgttgtaataagagaccgtaagcta
ttatctgaagaaggtttagttatcgttgttgttagtattgattttaatacaaataaatta
ctttctggtccagacattatttctcgaggatttgtatatatgagggaatcaggtcaatta
atttatgatgcacaacgcaaaatcaaaactgatgttattagtaagttaaatcaaaataaa
gatattcaatggcatcagattaaatcttctatcattgaaacattacaaccttatttattt
gaaaaaacagctagaaaaccaatgattttaccagtcattatgaaggtaaacgaacaaaaa
gaatcaaacaataaataa
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