Streptomyces ambofaciens: SAM23877_0690
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Entry
SAM23877_0690 CDS
T04055
Symbol
ybjK
Name
(GenBank) putative HTH-type transcriptional regulator YbjK
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
samb
Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
samb03000
]
SAM23877_0690 (ybjK)
Transcription factors [BR:
samb03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SAM23877_0690 (ybjK)
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_31
TetR_C_6
TetR_C_28
TetR_C_13_2
Motif
Other DBs
NCBI-ProteinID:
AKZ53739
UniProt:
A3KIR5
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Position
669664..670257
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AA seq
197 aa
AA seq
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MATGHTDPQRRERIIDATLDLIAEEGIARVSHRKIATRAGVPLGSMTYHFSGIDQLLREA
FGRFTDHIVAVFDEHLGAAADREQAREAVADLVHLLSEGSQRDLVLTQELYTLAARQPAY
RELTHEWMRRSRVHLEKHFDPDTARQLDALIEGLTLHRALAREPHGRALTREAIARVTTT
DRRTTTDRRTTTDRRAP
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggacacaccgacccgcagcggcgcgagcggatcatcgacgccaccctcgac
ctgatcgccgaggagggcatcgcgcgcgtctcccaccggaagatcgccacccgggccggg
gtccccctgggctcgatgacctaccacttcagcggcatcgaccagctgctgcgggaggct
ttcggccgcttcacggaccacatcgtcgcggtgttcgacgagcacctcggtgccgcggcc
gaccgcgagcaggcccgggaggcggtggccgacctcgtgcacctgctgtccgaggggagc
cagcgggacctggtgctcacccaggagctctacacactggccgcgcggcagccggcctac
cgggaactcacccacgagtggatgcgccgcagccgtgtccacctggagaagcacttcgac
ccggacacggcccgccagctggacgccctcatcgaagggctgacgctgcaccgcgccctg
gcccgggagccccacgggcgggccctcacccgggaggccatcgcccgcgtcaccaccacg
gaccggcgcaccaccacggaccggcgcaccaccacggaccggcgcgccccgtag
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