Streptomyces ambofaciens: SAM23877_1052
Help
Entry
SAM23877_1052 CDS
T04055
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb00250
Alanine, aspartate and glutamate metabolism
samb00310
Lysine degradation
samb00350
Tyrosine metabolism
samb00650
Butanoate metabolism
samb00760
Nicotinate and nicotinamide metabolism
samb01100
Metabolic pathways
samb01120
Microbial metabolism in diverse environments
Module
samb_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAM23877_1052 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAM23877_1052 (gabD)
00310 Lysine degradation
SAM23877_1052 (gabD)
00350 Tyrosine metabolism
SAM23877_1052 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SAM23877_1052 (gabD)
Enzymes [BR:
samb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SAM23877_1052 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SAM23877_1052 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SAM23877_1052 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
AKZ54101
UniProt:
A3KJR2
LinkDB
All DBs
Position
complement(1044208..1045647)
Genome browser
AA seq
479 aa
AA seq
DB search
MTGTPTRLLIGGTWTDAADGATMPVDDPATGEIIRRVADAGPKDARLAEDAAVRAQREWA
RTAPRARGEILRRAHEILLDRAEVFARLMTSEMGKPLAEARGEVAYAAEFFRWFSEEAVR
IDGGHGILPDGRHRMLLSRRPVGPCLLITPWNFPLAMGARKIGPALAAGCTAVLKPAPQT
PLSGLALAEVLQEAGLPDGVLNVVTTSRAGEVCEPLLRGGRIRKLSFTGSTQVGRLLLAQ
CADTVVRASMELGGNAPFIVFDDADLDVAVDGAMTAKMRNMGEACTAANRFFVHRSVAEE
FARRLARRMAALVVGPGTRDGVDVGPLIDAAGRAKVEDLVSDAVERGARLLVGGRTPEGP
GWFYPPTVLTDVRPDSRLTGTEIFGPVAAILTFDDEDEVVRRANDTPWGLVGYVFTEGLA
RALRVSERLETGMVGLNTGLVSNPAAPFGGVKQSGLGREGGKAGIEEFLEYQYVAMPSP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcacaccgacgcggctcctcatcggcgggacctggacggacgccgccgacggc
gcgaccatgccggtggacgatccggccaccggcgagatcatccgccgggtcgccgacgcc
ggccccaaggacgcccgcctcgccgaggacgcggcggtgcgggcgcagcgggagtgggcc
cgcaccgcgccccgggcgcgcggcgagatcctgcgccgcgcccacgagattcttctcgac
cgcgccgaggtgttcgcccgtctgatgacgtccgagatgggcaagcccctggcggaggcc
aggggagaggtggcctacgccgccgagttcttccgctggttctcggaggaggccgtgcgc
atcgacggcggccacggcatcctccccgacggacgccaccgcatgctgctctcccggcga
cccgtagggccctgcctgctgatcaccccgtggaacttcccgctggccatgggtgcccgg
aagatcggcccggcgctcgcggccggctgcacggcggtgctcaaaccggcgccgcagacc
ccgctctccggcctggccctcgccgaggtcctccaggaggcggggctgccggacggggtg
ctcaacgtcgtcaccacctcccgggcgggggaggtctgcgagccgctcctgcgcggcgga
cggatccgcaaactgtccttcaccggctccacccaggtcggccgcctcctgctcgcccag
tgcgccgacacggtcgtccgcgcctcgatggagctgggcggcaacgcacccttcatcgtc
ttcgacgacgccgacctggacgtggccgtggacggcgcgatgaccgccaagatgcgcaac
atgggcgaggcgtgcaccgccgcgaaccgcttcttcgtccaccgctcggtggccgaggag
ttcgcgcggcgtctcgcccggcggatggcggcgctcgtcgtgggccccggcacccgggac
ggggtcgacgtgggcccgctcatcgacgccgccgggcgggcgaaggtggaggatctggtg
tccgacgcggtggaacgcggcgcccggctcctcgtcggcggccgtacgcccgagggcccc
ggttggttctatccccccacggtcctcaccgacgtccgtccggacagccggctgacgggc
acggagatcttcggccccgtggcggcgatcctcaccttcgacgacgaggacgaggtcgta
cggcgcgccaacgacaccccctgggggctcgtcggctacgtcttcaccgagggcctcgcc
cgcgccctgcgcgtcagcgaacgcctggagaccggcatggtcggcctcaacaccggcctc
gtctccaacccggccgcgcccttcggcggtgtcaagcagtccgggctcggccgcgaaggc
ggaaaggcggggatcgaggagttcctggagtaccagtacgtcgcgatgccgagcccgtga
DBGET
integrated database retrieval system
