Streptomyces ambofaciens: SAM23877_1285
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Entry
SAM23877_1285 CDS
T04055
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb00250
Alanine, aspartate and glutamate metabolism
samb00310
Lysine degradation
samb00350
Tyrosine metabolism
samb00650
Butanoate metabolism
samb00760
Nicotinate and nicotinamide metabolism
samb01100
Metabolic pathways
samb01120
Microbial metabolism in diverse environments
Module
samb_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAM23877_1285 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAM23877_1285 (gabD)
00310 Lysine degradation
SAM23877_1285 (gabD)
00350 Tyrosine metabolism
SAM23877_1285 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SAM23877_1285 (gabD)
Enzymes [BR:
samb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SAM23877_1285 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SAM23877_1285 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SAM23877_1285 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AKZ54334
UniProt:
A3KKD8
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All DBs
Position
1315131..1316516
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AA seq
461 aa
AA seq
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MPIATVNPANGETLRTYEAMGEEEIERRLQLAEATFRTYRTTGFYERAGLMRRAADLLEA
DQNEIGKVITTEMGKPVKQARAEAAKCAKAMRWYADHAAELLADEEPAESDVKDSGASRA
LVRYRPLGPVLAVMPWNFPLWQVIRFAAPALMAGNVGLLKHASNVPQTALYLEDLFHRAG
YPEGCFQTLLIGSAAVDDILRDERVRAATLTGSEPAGRAVASTAGEMIKKTVLELGGSDP
FVVMPSADVERAAEVAVTARTQNAGQSCIAAKRFIVHTDVYDAFAERFTEGMRALTVGDP
MDEGTDVGPLSSEQGVEDLVELVDDAVRGGAAVLCGGERPDGPGWYYPPTVLAGVTREMR
IHREEAFGPVATLYRAADLDEAVLIANDSDFGLSSNVWTRDDADVDRFVRDLEAGGVYVN
GMTASHPAFPFGGVKRSGYGRELSGHGIREFCNITTVWHGA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgcgacggtgaacccggcgaacggcgagacgctcaggacgtacgaggccatg
ggcgaggaggagatcgagcgccggctccagctcgcggaggccaccttccgcacgtaccgg
accacggggttctacgagcgggccggactgatgcgccgggccgccgacctcctggaggcc
gatcagaacgagatcggcaaggtcatcaccaccgagatgggcaagcccgtcaagcaggcc
cgcgcggaggccgccaagtgcgccaaggcgatgcgctggtacgccgaccacgcggcggag
ctgctcgccgacgaggagcccgccgagtcggacgtgaaggactccggcgcctcccgggcc
ctggtccgctaccggccgctcggcccggtgctcgcggtgatgccgtggaacttcccgctc
tggcaggtgatccggttcgcggcgcccgccctgatggccggcaacgtggggctgctcaag
cacgcctccaacgtgccccagacggccctgtacctggaggacctgttccaccgggcgggc
taccccgagggctgcttccagaccctgctcatcggctcggcggcggtcgacgacatcctg
cgcgacgagcgggtgcgggccgccaccctcaccggcagcgagccggccggccgcgcggtg
gcctccacggccggggagatgatcaagaagacggtgctggagctgggcggcagcgacccc
ttcgtcgtgatgccgtccgcggacgtcgagagggccgccgaggtcgcggtgaccgcgcgc
acccagaacgccgggcagtcctgcatcgccgccaagcggttcatcgtccacacggacgtg
tacgacgccttcgccgaacgcttcaccgagggcatgcgggcgctgacggtcggcgacccc
atggacgaggggaccgacgtcggcccgctctccagcgagcagggcgtcgaggacctggtg
gagctggtcgacgacgcggtgcgcggcggcgcggccgtcctgtgcggaggcgaacgcccg
gacggtcccggctggtactacccgccgacggtcctcgccggtgtcaccagggagatgcgc
atccaccgcgaggaggccttcggcccggtcgccacgctgtaccgcgccgccgacctggac
gaggccgtgctgatcgccaacgattcggacttcgggctcagttccaacgtgtggacgcgc
gacgacgccgatgtggaccgtttcgtccgggacctggaggcgggcggcgtgtacgtcaac
gggatgacggcgtcccatccggcgttccccttcggcggggtcaagcgctcgggctacggc
cgtgagctgtccgggcacggaatccgggagttctgcaacatcaccaccgtatggcacgga
gcgtga
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