Streptomyces ambofaciens: SAM23877_1954
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Entry
SAM23877_1954 CDS
T04055
Symbol
pel
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb00040
Pentose and glucuronate interconversions
samb01100
Metabolic pathways
samb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SAM23877_1954 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAM23877_1954 (pel)
Enzymes [BR:
samb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SAM23877_1954 (pel)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
AKZ55003
UniProt:
A0A0K2APS5
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Position
complement(2019409..2020743)
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AA seq
444 aa
AA seq
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MSTSGWHGHATRRAVALAGCTALVLTLTAATAQARPGHHHPRDTARQTLPANDGWASHGT
GTTGGADAAPEHVYTVTTWAAFKAALAVEGTAPRIIKVKGTVDAVSEGCDAFAAPGYDFD
AYLEQYAPERWGLDTDLSAEPDDSPEGLRRASAARQNQAIKANVPANTTIIGVGRDAGIK
GASLQIKGVDNVIVRNLTFESPVDCFPQWDPTDGDKGNWNSEYDSAVVYGSTHVWLDHNT
FTDGEHPDSAAPTHFGMLYQQHDGQLDIVRGADHVTASWNVFTEHDKTILIGNSDSESTA
VGDRGHLKTTFHHNLFKGLVERAPRVRFGQVDVYNNHFVADEDYAYSFGVGKESQLVAEH
NAFTLPDGVSPAKVLKKWSEAPVTAAHNRVNGRSVDLIAVHNAEIPAETLRSGAGWTPTL
RTKVLPAWAVPFVVDHGAGAGRLR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatctggatggcatgggcatgccacacgaagagccgtcgcgctggccggctgc
accgctctggtgctgaccctgaccgccgccaccgcgcaggcgcgtcccggccaccaccac
ccccgcgacaccgcccgccagaccctgccggccaacgacggctgggcctcccacggcacc
ggtaccaccggcggagccgacgccgccccggagcacgtctacaccgtcaccacctgggcc
gccttcaaggctgccctcgccgtcgagggcaccgcgccgaggatcatcaaggtgaagggc
acggtcgacgcggtctccgagggctgcgacgccttcgccgcgcccggctacgacttcgac
gcctacctggagcagtacgccccggagcgctggggcctggacaccgacctgagcgccgag
cccgacgacagcccggagggcctgcgccgtgcctccgccgcccggcagaaccaggcgatc
aaggcgaacgtcccggccaacaccacgatcatcggcgtcgggcgcgacgccggcatcaag
ggcgccagcctccagatcaagggcgtggacaacgtcatcgtccgcaacctgaccttcgag
agccccgtcgactgcttcccgcagtgggaccccaccgacggcgacaagggcaactggaac
tccgagtacgacagcgccgtcgtgtacggctccacccacgtctggctggaccacaacacg
ttcaccgacggcgagcaccccgacagcgcggcgcccacccacttcgggatgctgtaccag
cagcacgacggccagctggacatcgtgcgcggcgccgaccacgtcaccgcctcgtggaac
gtcttcaccgagcacgacaagacgatcctgatcggcaacagcgacagcgagtccaccgcc
gtcggtgaccgcgggcacctgaagacgacgttccaccacaacctgttcaagggcctggtg
gagcgcgcgccgcgggtccgcttcggccaggtcgacgtctacaacaaccacttcgtggcc
gacgaggactacgcctacagcttcggtgtcggcaaggagtcccagctcgtggccgaacac
aacgccttcaccctgccggacggcgtcagcccggcgaaggtgctgaagaagtggagcgag
gcgccggtcaccgcggcgcacaaccgcgtcaacggcagaagcgtcgacctgatcgccgtg
cacaacgcggagatcccggccgagaccctccggtccggcgcgggctggacgcccaccctg
cgcaccaaggtcctcccggcctgggcggtccccttcgtcgtcgaccacggagcgggcgcc
ggccgcctccgctga
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