| Entry |
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| Symbol |
dnaE
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| Name |
(GenBank) DNA polymerase III subunit alpha
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| KO |
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| Organism |
samb Streptomyces ambofaciens
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:samb00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAM23877_2151 (dnaE)
03430 Mismatch repair
SAM23877_2151 (dnaE)
03440 Homologous recombination
SAM23877_2151 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:samb03032]
SAM23877_2151 (dnaE)
03400 DNA repair and recombination proteins [BR:samb03400]
SAM23877_2151 (dnaE)
Enzymes [BR:samb01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAM23877_2151 (dnaE)
DNA replication proteins [BR:samb03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAM23877_2151 (dnaE)
DNA repair and recombination proteins [BR:samb03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAM23877_2151 (dnaE)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2234790..2238329)
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| AA seq |
1179 aa
MSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWATNRTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAADYQD
IFGKDRYFLELMDHGIEIEHRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCANTRLIAEMIDTTGMFEKRD
LMPKFDIPAGFTEVTWFQEEVRRGMERRFPGGVPEDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPTHPRYSEAGEIRSMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIDLDLLSLPLDDPKTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNGLQEITPIHKELEEPLQEVLSVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVLFQAGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTGYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
MSNFAAQGDDVILFGLSAVRNVGTNVVESIIRCRKAKGKYLSFPDYLDKVEAVVCNKRTT
ESLIKAGAFDEMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGDEQTDEPGFGL
DVVFGEDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGISQLTGGDFGDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMIPDLSNAGTNAPVVLTIPATRVTPPMVSRLGEILTHHRGDSEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG |
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| NT seq |
3540 nt +upstreamnt +downstreamnt
gtgtccaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcgacgcctgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccactccgcgaagaaggcc
ggagtcaccccgatcatcggcatcgaggcgtacgtcgcccccgagtcgcgccgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtctccggttcgggcggt
tacacccacaagacgatgtgggcgacgaaccggacgggcctgcacaacctcttcaagctc
tcctccgacgcgtacgccgagggctggctccagaagtggccccggatggacaaggagacc
atctcccagtggtccgagggcatcgtcgcctccaccggctgcccctcgggcgaggtgcag
acccggctgcgcctcggccacttcgacgaggcgctgaaggccgccgccgactaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcac
cgggtccgcgacggcctgctggagatcggccggaagctcggcatcccgccgctggtcacc
aacgactcgcactacacctacgcgcacgaggcgaccgcccacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccggttcgacggcaccggctactac
ctgaagtcgacggacgagatgtacgccatcgactcctccgacgcctggcaggagggctgc
gccaacacgcgcctgatcgccgagatgatcgacaccacgggcatgttcgagaagcgcgac
ctcatgccgaagttcgacatccccgcgggcttcaccgaggtcacctggttccaggaggag
gtccgccgcggcatggagcgccgcttccccggcggcgtccccgaggaccgccagaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtgggccccggccgaggctcg
gcggccggttcgatcgtggcctacgcgatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaagatcaaggcgaagaacgccatcaaggac
tccgcacgtgtgctgggctacccgtacgccatgggagaccgcctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcacggacccgacccacccgcgg
tacagcgaggccggcgagatccgctcgatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccgccagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagccgatcgtcgaccacgccccgatctgggtgcggcacacggac
ggcgtgaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaagtcc
aacaaggggatcgacctcgacctgctgtcgctgcccctggacgaccccaagaccttcgag
ctgctccagcgcggtgacacgctcggcgtcttccagttcgacggcggccccatgcgctcg
ctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtctccgcgctctac
cgtcccggccccatgggcatggactcgcacaccaactacgcgctgcgcaagaacggcctc
caggagatcacgccgatccacaaggagctggaggagcccctccaggaggtcctgtcggtc
acctacggcctgatcgtctaccaggagcaggtccagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctgcgccgtgtgatgggcaagaagaagcccgacgag
ctggcgaagaacttcgtgctcttccaggccggcgcccggaagaacggctacagcgacgag
gcgatccaggccctgtgggacgtgctggtccccttcgccggctacgccttcaacaaggcg
cactcggccgcgtacggactggtctcgtactggaccggatacctgaaggcgaactacccg
gccgagtacatggccgccctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tacctcaacgagtgccggcgcatgggcatcaaggtcctgccgcccaacgtcaacgagtcc
atgtcgaacttcgccgcgcagggcgacgacgtgatcctcttcggcctctccgccgtccgc
aacgtcggcaccaacgtcgtcgagtcgatcatcaggtgccgcaaggccaaggggaagtac
ctctccttccccgactacctggacaaggtggaggcggtcgtctgcaacaagcggacgacg
gagtcgctgatcaaggccggcgccttcgacgagatggggcacacccgcaagggcctcacc
gcgcagtacgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggt
cagttcgacctcttcgggggcatgggcgacgagcagaccgacgaacccggcttcggactc
gacgtcgtcttcggtgaggacgagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggcctctacgtctccgaccacccgctcttcgggctggagcacgtgctgtccgac
aaggccgacgccggtatctcccagctcaccggcggtgacttcggcgacggcgcggtcgtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgcgaccgtcgaggacctggcgggctccatcgagtgcatgttcttcccggcgacg
taccagctcgtctccacccaactcgtcgaggacgccgtggtgttcgtcaaggggcgcctg
gacaagcgggaggacgtgccgcggctggtcgcgatggagctgatgatccccgacctgtcc
aacgcgggcaccaacgcgcccgtcgtcctcaccatcccggccacccgcgtcaccccgccg
atggtcagccgcctcggcgagatcctcacccatcaccggggtgacagcgaggtgcggatc
aagctccaggggccgacgaagacgacggtgctgcgcctggaccggcaccgggtgaagccg
gacccggccctgttcggtgacttgaaggtgctgctcggcccgtcctgcctggcgggctga |
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