Streptomyces ambofaciens: SAM23877_3125
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Entry
SAM23877_3125 CDS
T04055
Name
(GenBank) putative Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb00300
Lysine biosynthesis
samb00470
D-Amino acid metabolism
samb01100
Metabolic pathways
samb01110
Biosynthesis of secondary metabolites
samb01120
Microbial metabolism in diverse environments
samb01230
Biosynthesis of amino acids
Module
samb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAM23877_3125
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAM23877_3125
Enzymes [BR:
samb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SAM23877_3125
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AKZ56174
UniProt:
A0A0K2AT46
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All DBs
Position
3320018..3321436
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AA seq
472 aa
AA seq
DB search
MGDGTGMSGGTGMSGGPGGIGARRAARRDEAVRAAVEQGLLGPGTPIVGLLDVTGIRESA
AALRAAFEAVTAPGTPVLHAFAVKASPLVPVVRLLHEEGIGAEVASPGELALARAAGVPP
ERTVLDSPAKTPDELREALTLGVAVNADNPQELERVDALMAEGTSASPLGIRVNPQIGGG
SIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHAHTGSQGIPLSLMAEGVAE
TYALAEEINERAGRRQVDTLDIGGGLPVNFASDETTPTFADYARVLREAVPGLFDGRYGL
VTEFGRSLLAEHGAVVARVEYAKSAGGRPVAVTHAGVQVATRTVYAPGAWPLRIAAYDGK
GLPKQGPDVVQDVAGPACFAGDLLAVGRALPRLEQGDYAAALDTGAYYFAHHYAYNSLAR
PAVHGFAGRAGGGVAFATVREAQTVDEIVAEAGGEHAAALTDLAGRGGSAGS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgacggcacgggcatgagcggtggcacgggcatgagcggcggccccggcgggatc
ggcgcacggcgggcggctcggcgggacgaggcggtgcgggcggccgtggagcagggtctg
ctcggacccggtacgccgatcgtcgggctgctggacgtcaccgggatccgggagtcggcg
gcggcgctgcgagcggcgttcgaggcggtgacggcgcccgggacgcccgtgctgcacgcc
ttcgcggtgaaggcgtccccgctggtcccggtggtgcggctgctgcacgaggagggtatc
ggggcggaggtcgcgagcccgggtgagctggcgctggcgcgggcggcgggggtaccgccg
gagcggacggtgctggactcccccgccaagacgccggacgagctgcgggaggcgctcacg
ctgggcgtcgcggtcaacgcggacaacccgcaggaactggagcgcgtcgacgcgctgatg
gccgagggcacgagcgcctccccgctcggcatccgggtcaacccgcagatcggcgggggg
tccatcgaggccctgtcgacggcgacggcgacttccaagttcggggtggcgctgcgcgac
gagggagcgcgcgagtgggtggtgcgggcgtacctggacaggccgtggctgacccggctg
cacgcgcacaccgggtcccagggcattccgctctccctgatggccgagggcgtggcggag
acgtacgcgctcgccgaggagatcaacgagcgggccggacgccggcaggtcgacacgctc
gacatcggcggcggcctgccggtgaacttcgcgtccgacgagacgacaccgacgttcgcc
gactacgcgcgcgtgctgcgcgaggcggtgccggggctgttcgacggccggtacgggctg
gtcaccgagttcgggcggtccctgctggccgagcacggcgccgtcgtggcgcgcgtggag
tacgccaagagcgccggggggcgaccggtcgcggtgacgcacgcgggcgtccaggtcgcg
acgcggacggtgtacgcgccgggggcgtggccgctgcggatcgccgcgtacgacggcaag
gggctgccgaagcagggtccggacgtggtgcaggacgtggcgggtccggcgtgcttcgcg
ggcgacctgctggcggtcggacgcgccctgccgcggctggagcagggggactacgcggcg
gcgctggacacgggggcgtactacttcgcgcatcactacgcgtacaactcgctcgcccgt
cccgcggtccacgggttcgcggggcgcgcgggcggcggtgtcgccttcgcgaccgtccgg
gaggcccagacggtcgacgagatcgtcgccgaggcgggaggtgagcacgccgccgcgctg
acggacctggccggccgcgggggttccgccggctcgtag
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