Streptomyces ambofaciens: SAM23877_3223
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Entry
SAM23877_3223 CDS
T04055
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAM23877_3223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samb03400
]
SAM23877_3223
Enzymes [BR:
samb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAM23877_3223
DNA repair and recombination proteins [BR:
samb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAM23877_3223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
GspH
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AKZ56272
UniProt:
A0A0K2ATW8
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Position
complement(3432624..3433448)
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AA seq
274 aa
AA seq
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MCRYRALVLTVTSVNVNGLRAAAKKGFVEWLADTSADVLCLQEVRAEPQQLPEHVRTPDG
WHVTHAPAAAKGRAGVSLYTRREPDRVQVGFGSTEFGTSGRYVEADLPGVTVASLYLPSG
EVGTERQDEKVRFMGEFLAYLKELRERAAADGREVVVCGDWNIAHREADLKNWRANKKNS
GFLPEEREWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFDNDSGWRIDYQLAT
AGLAARAVKGYVERAATHAERWSDHAPVTVVYDR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgtgccggtatcgtgccctggtgctcaccgtgacctccgtgaatgtgaacggtctgcgc
gccgccgcgaagaagggtttcgtggagtggctcgccgacacctccgccgacgtgctgtgc
ctccaggaggtgcgggccgagccccagcagctccccgagcacgtccgtacgcccgacggc
tggcacgtcacgcacgcccccgccgccgccaagggccgggccggcgtctccctgtacacc
cgccgcgagcccgaccgcgtccaggtcgggttcggctcgacggagttcggcaccagcggc
cgctacgtcgaggccgacctgcccggtgtgacggtggcctcgctctacctcccctccggc
gaggtcggcaccgagcgccaggacgagaaggtccgcttcatgggcgagttcctcgcctac
ctcaaggaactgcgcgagcgcgccgccgccgacggccgcgaggtcgtggtctgcggcgac
tggaacatcgcccaccgcgaggccgacctgaagaactggcgcgccaacaagaagaactcc
gggttcctgccggaggaacgcgagtggctcggccgcgtcctcgacccggccgagggcggc
tacgtcgacgtggtgcgcgccctgcacccggacgtcgaggggccgtactcgtggtggtcg
taccgggggcgggctttcgacaacgattcgggttggcgcatcgactaccagctggccacg
gccgggctcgccgcgcgggccgtcaaggggtatgtcgagcgggccgccacgcacgccgag
cgctggtccgaccatgcgcccgtgacggtcgtctacgaccgctag
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