Streptomyces ambofaciens: SAM23877_3588 Help Entry SAM23877_3588     CDS       T04055                                  Symbol hrpA Name (GenBank) ATP-dependent helicase   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism samb  Streptomyces ambofaciens Brite KEGG Orthology (KO) [BR:samb00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:samb03019]     SAM23877_3588 (hrpA) Enzymes [BR:samb01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      SAM23877_3588 (hrpA) Messenger RNA biogenesis [BR:samb03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      SAM23877_3588 (hrpA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_19 AAA_22 nSTAND3 AAA_25 T2SSE SLFN-g3_helicase NACHT AAA_16 AAA_30 PhoH TsaE Zeta_toxin NTPase_1 Motif Other DBs NCBI-ProteinID:  AKZ56635 UniProt:  A0A0K2AU33 LinkDB All DBs Position 3818834..3822811 Genome browser AA seq 1325 aa AA seqDB search MSTHPAPALGTLASRLTELSLRDAHRLGRRLEGARRIRKPEARAAVLAEIDAEVAKAEQR IGERRARVPTVSYPEQLPVSQKKDVIAEAIRDHQVVIVAGETGSGKTTQIPKICVELGRG VRGMIGHTQPRRIAARTVAERVADELDTPLGEAVGWKVRFTDQVNPDATFIKLMTDGILL AEIQTDRELRAYDTIIIDEAHERSLNIDFLLGYLAQLLPKRPDLKVVITSATIDPERFSR HFGDAPIIEVSGRTYPVEVRYRPLLEEDGDDADRDQITAITDAVEELMGEGKGDILVFLS GEREIRDTADALEKKKYRFTEVLPLYARLSHAEQHRVFQQHTGRRIVLATNVAETSLTVP GIKYVIDPGFARISRYSHRTKVQRLPIEPISQASANQRKGRCGRTSDGICIRLYSEDDFD ARPEFTDAEILRTNLASVILQMTAAGLGDIEKFPFIDPPDHRNIRDGVQLLQELGALDPA QKDARKRLTDTGRKLAQLPVDPRLARMVLEADRNGCVREVMVIAAALSIQDPRERPSEKQ AQADQQHARFKDETSDFLAFLNLWRYVREQQKERGSSSFRRMCKQEYLNFLRIREWQDIY TQLRTVAKQMGIHLNEEDAPDDRVHVSLLAGLLSHVGMKDVKEAGGDGGRSTSKNEYLGA RNAKFAIFPGSALFKKPPRFVMSAELVETSRLWARVNARIEPEWVEPLAGHLLKRTYSEP HWEKDQAAVMAYEKVTLYGVPIVAQRKVNYGRIDPEVSRELFLRNALVEGDWRTHHKFFA DNRRLLTEVEELEHRARRRDILVDDETLFDFYDQRVPEHVVSGAHFDSWWKHKRHEQPDF LDFEREMLINEKAGAVTKDDYPDSWRQGQLKFRVTYQFEPGADADGVTVHVPLQVLNQVT DEGFDWQIPGLREQVVTELIRSLPKPIRRNYVPAPDYAQKFLQRAVPLQEPLTVTMAREL RRMVGVPFDAEDFDWSKVPGHLKITFRIVDERRRKLAEDKDLEALKLRLKPKARKALSQA AAATAERSGGESLERSGLTDWTIGTLTRVFETRRAGQPVKAYPALVDDGPTANTVSVRLF DTEAEQAQAMWKGTRRLILRNIPVNPAKFASEKLTNQQKLGLSANPHGSIQALFDDCAMA AADRLIADFGGPAWDEESYRKLYDKVRAEIVDTTVRTVGQVQQVLAAWQACERRLKAVRS PALLANLQDVRGQLDALVKPGFVTEAGIKRLPDLMRYLVAADRRLQQMPTGVQRDTSRME KVHEMRDEYAWLLEQMPRGRPVPRQVLEVRWMIEELRVSYFAHALGTAYPVSDKRIVKAI DALAP NT seq 3978 nt NT seq  +upstreamnt  +downstreamnt atgtctacgcaccccgcccccgccctcggcaccctcgcctcccggctgaccgagctgtcc ctgcgcgacgcgcaccggctcggccggcggctcgaaggtgcgcggaggatccgcaagccg gaggcccgcgccgccgtcctcgccgagatcgatgccgaggtggccaaggccgaacagcgc atcggtgaacgccgggcccgcgtgcccaccgtcagctatccggagcagctgcccgtcagc cagaagaaggacgtgatcgcggaggccatccgtgatcaccaggtcgtcatcgtcgccggt gagaccggctccgggaagacgacccagatcccgaagatctgcgtggaactgggccggggt gtgcgcggcatgatcggccacacccagccgcggcggatcgccgcgcgcaccgtcgccgag cgggtggcggacgaactggacacgcccctgggcgaggccgtcggctggaaggtgcgcttc accgaccaggtgaacccggacgccaccttcatcaagctgatgacggacggcatcctgctc gccgagatccagaccgaccgtgagctgcgcgcctacgacacgatcatcatcgacgaggcc cacgagcgctccctcaacatcgacttcctgctgggctacctcgcccagctgctgcccaag cggccggatctgaaggtcgtcatcacctcggcgacgatcgatccggagcgcttctcgcgg cacttcggcgacgcgccgatcatcgaggtgagcggacggacgtatccggtggaggtgcgt taccgccccctgttggaggaggacggcgacgacgccgaccgggaccagatcaccgcgatc accgacgccgtcgaggagctgatgggcgaggggaagggcgacatcctcgtcttcctctcc ggtgagcgggagatccgggacacggccgacgccctggagaagaagaagtaccggttcacg gaagtcctgccgctgtacgcccggctgtcgcacgccgagcagcaccgggtgttccagcag cacaccgggcgcaggatcgttctggcgaccaacgtcgccgagacctcgctgaccgtgccc ggcatcaagtacgtcatcgatcccgggttcgcccggatctcccggtacagccaccgcacc aaggtccagcggctgccgatcgagccgatctcgcaggccagcgccaaccagcgcaagggc cgctgcgggcggaccagcgacggcatctgcatccggctgtactccgaggacgacttcgac gcgcggccggagttcaccgacgccgagatcctccgtacgaacctcgcctccgtgatcctc cagatgaccgcggccggcctcggcgacatcgagaagttccccttcatcgacccgccggac caccgcaacatccgcgacggcgtgcagctcctccaggagctgggcgcgctggacccggca cagaaggacgcacgcaagcggctcaccgacaccggccggaagctggcccagctgcccgtc gacccgcggctggcccggatggtgctggaggccgacaggaacggctgcgtccgcgaggtc atggtcatagcggcggccctgtccatccaggacccgcgggagcggccgtccgagaagcag gcgcaggccgaccagcagcacgcccgcttcaaggacgagaccagcgacttcctggccttc ctgaacctgtggcggtacgtgcgggagcagcagaaggagcgcggctcctcgtccttccgc cggatgtgcaagcaggagtacctcaacttcctgcgcatccgcgagtggcaggacatctac acgcagttgcgcacggtcgccaagcagatgggcatccacctcaacgaggaggacgcaccc gacgaccgcgtccatgtgtcgctgctggccggcctcctctcccacgtcggcatgaaggac gtgaaggaggccggaggggacggcgggaggagcacgtcgaagaacgagtacctgggcgcg cggaacgccaagttcgcgatcttccccggttcggcgctcttcaagaaacccccgcggttc gtgatgtcggccgagctggtggagacctcccgcctgtgggcccgcgtcaacgcgaggatc gagcccgaatgggtcgagccgctcgccggacacctcctcaaacgcacctacagcgagccg cactgggagaaggaccaggcggccgtgatggcctacgagaaggtcacgctgtacggcgtg ccgatcgtggcccagcgcaaggtgaactacgggcggatcgacccggaggtcagccgggag ctgttcctccgcaacgccctcgtcgagggcgactggcgcacgcaccacaagttcttcgcg gacaaccgccggctgctcaccgaggtcgaggagctggagcaccgcgcccggcgccgggac atcctggtcgacgacgagacgctcttcgacttctacgaccagcgggtgcccgaacacgtc gtctccggcgcgcacttcgactcctggtggaagcacaagcgccacgagcagcccgacttc ctcgacttcgagcgcgagatgctcatcaacgagaaggcgggtgcggtcaccaaggacgac tacccggactcgtggcgtcagggacagctgaagttccgggtgacgtaccagttcgagccg ggcgcggacgccgacggtgtgaccgtccacgttccgctccaggtgctcaaccaggtcacg gacgagggcttcgactggcagatccccggcctgcgggagcaggtcgtcaccgagctgatc cgctccctgcccaagccgatccgccgcaactacgtaccggcgccggactacgcgcagaag ttcctccagcgggccgtgcccctccaggagccgctgacggtgaccatggcgcgggagctg cggcgcatggtgggggtgccgttcgacgcggaggacttcgactggtcgaaggtcccgggc catctgaagatcactttccggatcgtcgacgagcggcgccgcaagctggccgaggacaag gacctggaggcgctgaagctgcggctgaagccgaaggcgcgcaaggcgctgtcgcaggcc gcggcggccaccgccgagcgcagcggcggcgagtccctggagcgctcgggtctgacggac tggacgatcggcaccctgacccgcgtcttcgagacgcgccgggccggacagccggtgaag gcgtacccggccctcgtcgacgacggaccgacggcgaacaccgtctccgtacgcctcttc gacacggaggccgagcaggcgcaggcgatgtggaagggcacccgccggctgatcctgcgc aacatcccggtgaacccggcgaagttcgcgtccgagaagctgaccaaccagcagaagctg gggctgtccgccaatccgcacggttcgatccaggcgctgttcgacgactgcgccatggcg gcggcggaccggctgatcgcggacttcggcgggccggcctgggacgaggagtcgtaccgg aagctctacgacaaggtccgggcggagatcgtcgacacgaccgtccgcacggtgggccag gtgcagcaggtgctggcggcctggcaggcctgcgaacgccgcctgaaggccgtacggagc cccgcgctgctggcgaacctccaggacgtgcgggggcagctggacgcgctggtgaagccc ggcttcgtcacggaggcggggatcaagcggctgccggacctgatgcggtatctggtcgcc gcggaccggcggctccagcagatgccgaccggggtccagcgggacacgtcccggatggag aaggtccacgagatgcgggacgagtacgcgtggctgctggagcagatgccgcggggcagg ccggtgccgcggcaggtgctggaggtccgctggatgatcgaggagctccgggtcagctat ttcgcgcacgcgttgggcacggcgtaccccgtctccgacaagcggatcgtcaaggccatc gacgcgctcgcaccgtga

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