Streptomyces ambofaciens: SAM23877_3650
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Entry
SAM23877_3650 CDS
T04055
Symbol
sigF
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
samb
Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
samb03021
]
SAM23877_3650 (sigF)
Transcription machinery [BR:
samb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAM23877_3650 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_31
MarR
DUF7343
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AKZ56695
UniProt:
A0A0K2AU87
LinkDB
All DBs
Position
3885193..3886131
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AA seq
312 aa
AA seq
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MSADQGSSKVLALAESETAPDTIEALGPVGPIDSVDDVQAVEAVPTLDAVPAQALPAPGA
IDTRTLSRSLFLRLAALDENSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVG
TIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASD
DLSQKLDRSPTVGELATVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLG
YEDTALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTR
TLAQLREGLISD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcgcgctcgcggagagcgagaccgcgccc
gacacgatcgaggcactcggccccgtcggccccatcgactccgtcgatgacgtgcaggcc
gtcgaagccgtaccgaccctcgacgccgtgccggcccaggcccttccggccccgggggcc
atcgacacccgcaccctgtcccgctccctgttcctgcggctcgccgccctcgacgagaac
agccccgaacgtgcctacgtccgggacaccctgatcgagctcaacctcccgctggtgcgt
tacgccgccgcgcgcttccgctcccgcaacgagccgatggaggacatcgtccaggtcggc
accatcggcctgatcaaggcgatcgaccgcttcgactgcgaacggggtgtggagttcccg
acgttcgcgatgccgacggtggtcggcgagatcaagcggttcttccgcgacacctcgtgg
tcggtgcgcgtgccgcgccgcctccaggagctgcgcctggccctgacgaaggccagcgac
gacctctcccagaagctggaccgctccccgaccgtcggcgagctggccaccgtgctgggc
gtgtccgaggaggacgtcgtcgacggcctcgcggtgggcaacgcctacaccgcctcctca
ttggactcaccggccccggaggacgacggcggcgagggctcgctggcggaccgcctcggc
tacgaggacacggccctggagggcgtggagtaccgcgagtccctcaagccgctgctggcc
aagctgccgccccgggagcggcggatcatcatgctgcgcttcttcgccaacatgacccag
tcgcagatcggcgaggaggtcggcatctcgcagatgcacgtctcccggctgctgacccgc
accctggcgcagctgcgcgagggcctgatctcggactga
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